| DPOGS203362 | ||
|---|---|---|
| Transcript | DPOGS203362-TA | 402 bp |
| Protein | DPOGS203362-PA | 133 aa |
| Genomic position | DPSCF300003 + 120125-124226 | |
| RNAseq coverage | 331x (Rank: top 35%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014423 | 6e-55 | 70.23% | |
| Bombyx | BGIBMGA011994-TA | 6e-56 | 71.43% | |
| Drosophila | CG30105-PA | 6e-24 | 46.85% | |
| EBI UniRef50 | UniRef50_E3X4U7 | 1e-25 | 44.55% | Putative uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3X4U7_ANODA |
| NCBI RefSeq | XP_309402.3 | 4e-27 | 45.13% | AGAP011243-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|350412794 | 3e-28 | 49.19% | PREDICTED: ribonuclease H2 subunit C-like [Bombus impatiens] |
| NCBI nr blastx | gi|350412794 | 2e-27 | 49.59% | PREDICTED: ribonuclease H2 subunit C-like [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | aga:AgaP_AGAP011243 | 1e-26 | ||
| K10745 (RNASEH2C) | maps-> | DNA replication | ||
| InterPro domain | [22-130] IPR013924 | 4.7e-22 | Ribonuclease H2, subunit C | |
| Orthology group | MCL14087 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203362-TA
ATGTCTATCCATGTAGAGAATAAACTTAAAGATTCTATTAACGACGACATATTTAAGCAAAAAGCACATTACATACCTTGTAAAATTGATGAAGACGGTCAGGCAAATGTGAAGAAATACTTCGCGCCCTACATTGTCGAAAATACTGACGGTGAATTGTCAGCGACATTCCGCGGTCACTCCCTGGATGGTGTGAAATTGTCCCTCCCCGAAGGTTACAGAGCTGTATTAGTGACGGAAACCAAACGACCGCTCTCAGAAGATGTCGAGAGAAAATTCCAAATAGCTGGTGGTGTAGGAGATATAACGTATTGGAATTGGGATAAAAAACCATCGAAAAACGACAGTTTAGTTAGAGCTCTGGATTGGATCGATATAGCTGAAGCTCTGCACGCTAACTGA
>DPOGS203362-PA
MSIHVENKLKDSINDDIFKQKAHYIPCKIDEDGQANVKKYFAPYIVENTDGELSATFRGHSLDGVKLSLPEGYRAVLVTETKRPLSEDVERKFQIAGGVGDITYWNWDKKPSKNDSLVRALDWIDIAEALHAN-