| DPOGS203733 | ||
|---|---|---|
| Transcript | DPOGS203733-TA | 444 bp |
| Protein | DPOGS203733-PA | 147 aa |
| Genomic position | DPSCF300010 - 581191-581789 | |
| RNAseq coverage | 0x (Rank: top 96%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | % | |||
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_D7F177 | 2e-30 | 53.49% | Endonuclease-reverse transcriptase n=3 Tax=Obtectomera RepID=D7F177_BOMMO |
| NCBI RefSeq | XP_001177848.1 | 1e-22 | 44.17% | PREDICTED: similar to protein F28E10.3 [imported] - Caenorhabditis elegans [Strongylocentrotus purpuratus] |
| NCBI nr blastp | gi|298204363 | 7e-30 | 53.49% | endonuclease-reverse transcriptase [Bombyx mori] |
| NCBI nr blastx | gi|298204363 | 3e-29 | 53.49% | endonuclease-reverse transcriptase [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003964 | 2.3e-17 | RNA-directed DNA polymerase activity | |
| GO:0003723 | 2.3e-17 | RNA binding | ||
| GO:0006278 | 2.3e-17 | RNA-dependent DNA replication | ||
| KEGG pathway | ||||
| InterPro domain | [10-115] IPR000477 | 2.3e-17 | Reverse transcriptase | |
| Orthology group | MCL27789 | Specific divergent | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203733-TA
ATGGATCACATCCATACACTTGAACAAAACAGTGTTAGCAGAGTCAAGCTAGAGTCTAGAGGAGACGAAATCAAAATCGCCCAAAGCGTCAGGCAGGGAGACCCTTTGTCTCTAAAATTGTTCATAGCCGTCTTGCAATGCATATTCTCCAAATTGAACTGGACTTCTGAAGGTATCCCCATAAACAACAAACGCCTCACACATCTGAGATTTGCTGACGACATCGTGATCTTTGCCGAAACTCCTAAGAAGTTAGAAAATATGATATCGCAACTAAACATAGAGAGCAAATATGTTGGCCTGCATATGAACCTAAGCAAGACAAAAATAATGACAAACAGTAAGAGAGATAAAGTAATGCTTGATGGTGTCGAACTTGAATGTGTGGAACAGTACAGCTTGATGGTGTCGAACTTGAATATGTGGAACAGTACGTATACATAG
>DPOGS203733-PA
MDHIHTLEQNSVSRVKLESRGDEIKIAQSVRQGDPLSLKLFIAVLQCIFSKLNWTSEGIPINNKRLTHLRFADDIVIFAETPKKLENMISQLNIESKYVGLHMNLSKTKIMTNSKRDKVMLDGVELECVEQYSLMVSNLNMWNSTYT-