| DPOGS203775 | ||
|---|---|---|
| Transcript | DPOGS203775-TA | 819 bp |
| Protein | DPOGS203775-PA | 272 aa |
| Genomic position | DPSCF300010 + 694848-699357 | |
| RNAseq coverage | 582x (Rank: top 22%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003745 | 2e-136 | 86.59% | |
| Bombyx | BGIBMGA013352-TA | 1e-129 | 94.40% | |
| Drosophila | NfI-PB | 9e-111 | 75.98% | |
| EBI UniRef50 | UniRef50_D6W8F2 | 8e-119 | 87.29% | Nuclear factor 1 n=2 Tax=Tribolium castaneum RepID=D6W8F2_TRICA |
| NCBI RefSeq | XP_971603.1 | 2e-120 | 87.71% | PREDICTED: similar to Nuclear factor I CG2380-PB [Tribolium castaneum] |
| NCBI nr blastp | gi|91092246 | 3e-119 | 87.71% | PREDICTED: similar to Nuclear factor I CG2380-PB [Tribolium castaneum] |
| NCBI nr blastx | gi|91092246 | 2e-116 | 88.84% | PREDICTED: similar to Nuclear factor I CG2380-PB [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 1.1e-150 | nucleus | |
| GO:0006355 | 1.1e-150 | regulation of transcription, DNA-dependent | ||
| GO:0006260 | 1.1e-150 | DNA replication | ||
| GO:0003700 | 1.1e-150 | sequence-specific DNA binding transcription factor activity | ||
| GO:0005622 | 5.5e-32 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [39-212] IPR000647 | 1.1e-150 | CTF transcription factor/nuclear factor 1 | |
| [96-204] IPR003619 | 5.5e-32 | MAD homology 1, Dwarfin-type | ||
| [35-75] IPR019548 | 1.5e-25 | CTF transcription factor/nuclear factor 1, N-terminal | ||
| Orthology group | MCL10840 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203775-TA
ATGTCACCAAGTGTATTAACCTTCCCTGGTCAAGTCACTGGCATGTTCTTCGTCGAGAGCTGCCAGTGCCACGTGTCAGATCCTGGCAGCCCAGCAGTGTTCTGTCTAGCCAATGACGAGTTCCATCCGTTCATAGAGGCCCTGATGCCTTTTGTAAAGTCCTTTTCGTACACGTGGTTCAATTTGCAAGCGGCCAAAAGGAAATATTACAAAAAGCACGAGAAACGGATGAGTCTAGAGGAGGAGCGACACACTAAATATGAACTACAGAACGAGAAAGCAGAAGTGAAACATAAATGGGCATCGCGGTTATTAGGGAAGTTGAGGAAAGATATCACACAGGACTGTAGGGAGGACTTCGTGTTGAGCATCACCGGGAAAAGACCAGCCGTCTGCGTGCTCTCCAACCCTGACCAGAAGGGGAAGATGAGGAGGATAGACTGTCTGAGACAAGCTGATAAGGTGTGGCGATTAGATTTAGTGATGGTTATATTGTTCAAAGCGATACCCCTAGAGAGTACGGACGGTGAACGTTTAGAGAAACACCCCGAGTGCACCCAGCCGGGGCTGTGCGTGAACCCCTACCACATCAACGTGTCAGTGAGAGAACTCGACCTGTACCTGGCGAATTTCATCAACAGCTATGATATACTTAGCGGATCTCTCTCGCCTCACCCGAATAGGGACAAAGAGAATGAACACGAGGCTAAGAACAAAGGGTATACCCATAATCCATACAACGGTGTTATTTGCAACGATATCATTTTAGCGACCGGTGTCTTCTCTTCGAAGGAGCTTTGGAAGCTGTCTAAAGGTTAG
>DPOGS203775-PA
MSPSVLTFPGQVTGMFFVESCQCHVSDPGSPAVFCLANDEFHPFIEALMPFVKSFSYTWFNLQAAKRKYYKKHEKRMSLEEERHTKYELQNEKAEVKHKWASRLLGKLRKDITQDCREDFVLSITGKRPAVCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKAIPLESTDGERLEKHPECTQPGLCVNPYHINVSVRELDLYLANFINSYDILSGSLSPHPNRDKENEHEAKNKGYTHNPYNGVICNDIILATGVFSSKELWKLSKG-