| DPOGS203787 | ||
|---|---|---|
| Transcript | DPOGS203787-TA | 585 bp |
| Protein | DPOGS203787-PA | 194 aa |
| Genomic position | DPSCF300010 + 1182046-1182630 | |
| RNAseq coverage | 42x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005952 | 8e-98 | 94.19% | |
| Bombyx | BGIBMGA003447-TA | 4e-90 | 75.52% | |
| Drosophila | CG12079-PA | 1e-62 | 60.00% | |
| EBI UniRef50 | UniRef50_O75489 | 4e-61 | 61.99% | NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial n=131 Tax=cellular organisms RepID=NDUS3_HUMAN |
| NCBI RefSeq | XP_966588.1 | 8e-64 | 59.26% | PREDICTED: similar to AGAP006456-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|322796534 | 2e-63 | 60.56% | hypothetical protein SINV_03420 [Solenopsis invicta] |
| NCBI nr blastx | gi|322796534 | 2e-62 | 60.89% | hypothetical protein SINV_03420 [Solenopsis invicta] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016651 | 1.6e-36 | oxidoreductase activity, acting on NADH or NADPH | |
| GO:0055114 | 1.6e-36 | oxidation-reduction process | ||
| GO:0008137 | 4.7e-30 | NADH dehydrogenase (ubiquinone) activity | ||
| KEGG pathway | tca:658397 | 2e-63 | ||
| K03936 (NDUFS3) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [22-136] IPR010218 | 1.6e-36 | NADH dehydrogenase, subunit C | |
| [34-132] IPR001268 | 4.7e-30 | NADH:ubiquinone oxidoreductase, 30kDa subunit | ||
| Orthology group | MCL24903 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203787-TA
ATGCCGAAATATGTTCAAAAGATCCAAATGCAACACACTGACGAATTAGAAATATTAGTTGCTCCAGAAGGATTTCACCCCGTTCTTTCATTTATGGCACATCATCAACATGCCTGTTTCAATCAGTGTTCTCTAGCGACAGCCGTAGATGTACCTAGTAGAGAATATAGATTTGAAGTTGCTTATAATATTCTTAGTTTAAGATATGGTGAGAGGGCTCGAGTGAAGACATATACTGATGAACTGACTCCTTTGCATTCAGCAGTAAGTCTTTGGGGGAATTGCAACTGGCTAGAAAGAGAAATCTATGATATGTTTGGTATAATATTTACTAATCACCCTGACTTGAGAAGGATTCTGACTGATTACGGTTTTCAAGGACATCCACTAAGGAAGGATTTTCCTCTCGTGGGTTACACTGAAGTAAGATACGATGATGAGCTAAAGAAAATAGTTTATGAGCCAGTAGAATACGCACAAGAAATGCGTTCCTATAAATTGGAGTCACCTTGGAATTACTTAAGAAATTTCCACGAGGGCTACAATTCTCCTAAGCCTGAAAAAGAGAAAGGGAAACAAAATTAA
>DPOGS203787-PA
MPKYVQKIQMQHTDELEILVAPEGFHPVLSFMAHHQHACFNQCSLATAVDVPSREYRFEVAYNILSLRYGERARVKTYTDELTPLHSAVSLWGNCNWLEREIYDMFGIIFTNHPDLRRILTDYGFQGHPLRKDFPLVGYTEVRYDDELKKIVYEPVEYAQEMRSYKLESPWNYLRNFHEGYNSPKPEKEKGKQN-