Monarch geneset OGS2.0

DPOGS203968
TranscriptDPOGS203968-TA2580 bp
ProteinDPOGS203968-PA859 aa
Genomic positionDPSCF300005 + 634247-640389
RNAseq coverage252x (Rank: top 41%)
Annotation
HeliconiusHMEL0179430.055.39% 
BombyxBGIBMGA003897-TA0.064.38% 
DrosophilaAcf1-PA4e-1051.11% 
EBI UniRef50UniRef50_UPI0001792CEB9e-17439.77%UPI0001792CEB related cluster n=3 Tax=unknown RepID=UPI0001792CEB
NCBI RefSeqXP_001945737.12e-17439.77%PREDICTED: similar to NP95 [Acyrthosiphon pisum]
NCBI nr blastpgi|2608116888e-16438.89%hypothetical protein BRAFLDRAFT_205176 [Branchiostoma floridae]
NCBI nr blastxgi|3443061281e-16739.31%PREDICTED: E3 ubiquitin-protein ligase UHRF1 [Loxodonta africana]
Group
Gene OntologyGO:00423935.3e-75histone binding
GO:00168812.2e-13acid-amino acid ligase activity
GO:00055151.6e-11protein binding
GO:00082701.7e-11zinc ion binding
KEGG pathway 
InterPro domain[445-619] IPR0031055.3e-75SRA-YDG
[776-852] IPR0130832.2e-16Zinc finger, RING/FYVE/PHD-type
[203-265] IPR0219912.2e-13Domain of unknown function DUF3590
[316-402] IPR0110112.5e-13Zinc finger, FYVE/PHD-type
[357-403] IPR0197871.6e-11Zinc finger, PHD-finger
[356-402] IPR0019651.7e-11Zinc finger, PHD-type
[21-70] IPR0006262.1e-08Ubiquitin
[789-828] IPR0189573.3e-07Zinc finger, C3HC4 RING-type
[789-828] IPR0018412.1e-06Zinc finger, RING-type
Orthology groupMCL15461 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS203968-TA
ATGCACGTTCGTGTGCGCATGTTTGGTAAACCTGATACTATTGTTGTAGTAGAATCAAAACTTACGAAGTTGCAACAGTTTCGACGTATTATAAAAGAAAAATTTGATGTCGAACCAAAGTTACAACGGTTATTTTACGGCGGAAAACTGCTAGAAGATGGTTACACATTCCATGACTATAACATTAAACTGAATGATGTAATCCAGCTCATTGCTGTACCCCAGACTGTTGAAAGTGAAGATGAAAAGAAATCACTTGACAACCAAGAGCAAGTAAAAGAATCCGACTTTGAGGAGAAAACAATAGTTTATACGGATGTTACAAGTACAGTCTATGCAGTTGGGGATTTAGTTGATGTCAAAGACAGAGAACAGGGTGCCTGGTTAGAAGGTAAAATAGTTAGGATAGTCCTAGATCCTAAAGTAAATTATGAAAATGAACAAAACAAGGAAGATTTAAATAGTAGTTTGGATAATAAAAATGATCTTGAAAACAAACCACCAAGTAATATCTCTGAACAGTCAAACACACAAAAGATTGGTATTGCTAAATATTTTACAAAACAGACAAATGGAAAGAGATTGTCTAAGGATTTTAAGGTAAAAACAGTAAAAGTTACAGCAGAGAATGTTCTGTATAAGGTGCAATTAGATGATGATGAAGAAGATTCTGAGTTGTTTTGTAAGCTCAAAGAAATAAGACCCAGAGCTCGGCACGAGATTGATGTCAAGGATTTAATGCCTGGACAAAAGGTCATGATAAATCACAACACTGATGAACCATTGGAAAAAGGATATTGGTATGATTTCAAAGTAGATGAAATAAAAAAATTGAGGACAAGCTATGAGATTGTTGGAACTTTGTACCTCGGTCCAGACTCAGTTCCACAAAATGACACTAAAGTTAAAATCCATGATAAAATATTTACTATTGAGGAACCAGTGCCCTTGGAAAAGAGAACTGAAGATTATCTTAAGTCAATACAAGAGACACCGGCAGCCAGATCTAAACCGCTGAATTGCTTAAAATGTAGAGACAATGAAGAAGAACCCTGCAAGGAATGTGGATGTTATTTATGTGCCCAAAAAAATGATCCAGATAAGATAATTCTGTGTGATGAATGCCACAATGGTTACCACATGGTATGTCTGAAGCCACCACTGACCGTGCTACCTGATGATGACTGGTATTGTCCATCATGTAAGCGGGATCCAAACGATGTCATAGCACCCGGTGCATCCAAACAAGCAAAAAAATCCAATACTTCTAAGACTAACAGAGATTGGGGCAGAGGCATGGCATGTGTTGGAAAAACAAAAACTTGTCCAATGCCCCTAAACCATTTTGGTCCTATACCTGGAATAGAAGTTGGAATGTGTTGGAGATTTAGGATACAGCTTTCTGAATCAGGAGTGCACAGACCACCAGTTTCCGGAATACATGGCCGGGACATTGAAGGAGCCTACAGTATAGTGCTGTCAGGTGGATATGAAGATGATGTCGACAACGGCTATGAGTTCACTTATACTGGTAGCGGTGGAAGAAATCTGTCGGGAAACAAGCGAACCGCTGAACAATCATGTGATCAAACTCTTACTAGGGAGAACAAAGCGCTGGCTCGCAACTGTGCCGTTGATAAGGTGAGTGAGGACGGTGGGGACGCTGGGGATGATTGGCGCAGAGGAAAACCAGTGAGGGTAGTCAGATCCTGCAAAATGATGAAACACTTTCCGAAATATGCACCTCAGGAAGGAATACGATACGATGGTATCTACAAGGTGGTGAAATATTATCCCGAAAGAGGTCTATCCGGGTATATTGTGTGGAAGTACCTTCTGCGGAGAGATGACCCTAGTCCAGCACCATGGGAAACGGGGGCAAAAAAATATAATATCGTGTACCCAGATGGCTATTTAGAAGCGGAAGCGGAAAAGAAAGCCTTGAAAGAAAAAGCAACGAATAGTAAAAAATCTTCAAAAAGAGTAAAACGTAACGAAAGTTCTTCATCAGAAACAGATTCGTCTCCAGTAGTAAAAAAACGGAAAGTACAAAAAACACCTCAGAATGGTAAAGTCCGTAAAAAACAAAGCTTGTCAGACAGCAGTGAGTCCTCATCTGAAATTGAAAAATCTACAAGCAAAGACACGAACCCGAAAAAAGAGAATAGAAAATCTGTAATACCGAGCATATTTACGAAAAGTCCAAAGAACAAAAAAGTAAAAGCGGAAGAACCGCTTAGTGGAGAGGAAAAAGAGAGTGTGATGGCTGACACCCTCAATTCAAAATTATGGGGCGACTGTTTAGATGTCTGTGAGAAGCAAGGAAAGAAGGAATTCATAGAGCATGTGACTCAAGTGTTCCTTTGCATCATCTGTCAGGATGTGGCTGTAAACCCGGTCACTACACCATGCTCTCATAACTTTTGTATTGGCTGTCTGAAGCTAGCGTTCAAGTCTTCGGATTCCCAGGGCTGCCCATGTTGTAGACAAAGTCTCGCTAAAATGGAAGTACAAGTGAACGAACAACTAAAGAAAGCCTTGCAAACCATACTAAAAGGATATGATGCCGGCAAGAAATAA

Protein sequence:

>DPOGS203968-PA
MHVRVRMFGKPDTIVVVESKLTKLQQFRRIIKEKFDVEPKLQRLFYGGKLLEDGYTFHDYNIKLNDVIQLIAVPQTVESEDEKKSLDNQEQVKESDFEEKTIVYTDVTSTVYAVGDLVDVKDREQGAWLEGKIVRIVLDPKVNYENEQNKEDLNSSLDNKNDLENKPPSNISEQSNTQKIGIAKYFTKQTNGKRLSKDFKVKTVKVTAENVLYKVQLDDDEEDSELFCKLKEIRPRARHEIDVKDLMPGQKVMINHNTDEPLEKGYWYDFKVDEIKKLRTSYEIVGTLYLGPDSVPQNDTKVKIHDKIFTIEEPVPLEKRTEDYLKSIQETPAARSKPLNCLKCRDNEEEPCKECGCYLCAQKNDPDKIILCDECHNGYHMVCLKPPLTVLPDDDWYCPSCKRDPNDVIAPGASKQAKKSNTSKTNRDWGRGMACVGKTKTCPMPLNHFGPIPGIEVGMCWRFRIQLSESGVHRPPVSGIHGRDIEGAYSIVLSGGYEDDVDNGYEFTYTGSGGRNLSGNKRTAEQSCDQTLTRENKALARNCAVDKVSEDGGDAGDDWRRGKPVRVVRSCKMMKHFPKYAPQEGIRYDGIYKVVKYYPERGLSGYIVWKYLLRRDDPSPAPWETGAKKYNIVYPDGYLEAEAEKKALKEKATNSKKSSKRVKRNESSSSETDSSPVVKKRKVQKTPQNGKVRKKQSLSDSSESSSEIEKSTSKDTNPKKENRKSVIPSIFTKSPKNKKVKAEEPLSGEEKESVMADTLNSKLWGDCLDVCEKQGKKEFIEHVTQVFLCIICQDVAVNPVTTPCSHNFCIGCLKLAFKSSDSQGCPCCRQSLAKMEVQVNEQLKKALQTILKGYDAGKK-