Monarch geneset OGS2.0

DPOGS204107
TranscriptDPOGS204107-TA2193 bp
ProteinDPOGS204107-PA730 aa
Genomic positionDPSCF300184 - 220265-223951
RNAseq coverage863x (Rank: top 15%)
Annotation
HeliconiusHMEL0109840.084.75% 
BombyxBGIBMGA013594-TA0.085.77% 
DrosophilaCG16941-PA0.055.48% 
EBI UniRef50UniRef50_Q9VEP90.055.48%CG16941 n=7 Tax=Sophophora RepID=Q9VEP9_DROME
NCBI RefSeqXP_969681.10.056.75%PREDICTED: similar to spliceosome associated protein [Tribolium castaneum]
NCBI nr blastpgi|3323751160.057.14%unknown [Dendroctonus ponderosae]
NCBI nr blastxgi|910763140.058.44%PREDICTED: similar to spliceosome associated protein [Tribolium castaneum]
Group
Gene OntologyGO:00063964.9e-28RNA processing
GO:00037234.9e-28RNA binding
GO:00055155.7e-13protein binding
KEGG pathwaytca:6581790.0 
 K12825 (SF3A1, SAP114)maps-> Spliceosome
InterPro domain[220-457] IPR0220302.8e-43Pre-mRNA splicing factor PRP21-like protein
[32-85] IPR0000614.9e-28SWAP/Surp
[659-725] IPR0006265.7e-13Ubiquitin
Orthology groupMCL12197 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204107-TA
ATGCCTCCGGGGCAGCAGCATGAAGGTCTGCCAGAGGAGCCTCAAGCGCCCCCGCCACCCGTTATCGGCATCATATATCCACCACCTGAAGTCAGGAATATCGTGGACAAAACAGCAAGCTTCGTAGCCCGAAACGGCCCCGAATTTGAGGCTCGTATTAGACAGAATGAACTCGGCAATCCAAAATTCAACTTTCTCAACTCTGGGGATCCCTACCATGCATATTACCAGCATAAGGTCAAAGAAATCCGGGAGGGCAAAGGTGATTCTATTGGCCCCGCTCCAGTCGCCGCTGTCCAGCGTCCCGGCCTCGCTCCAGCCACTGCTGCCCGTCAACAGGAGCTTCTTAAAGCAGCCGCGCCTCTCGAACCACCGCCGCCTCGTGATCCCCCTCCAGACTTCGAGTTTATAGCTGATCCTCCGTCTATATCAGCCCTCGAACTCGACATTGTCAAACTTACTGCACAATTCGTTGCCCGGAACGGTCGACAGTTTTTAACAGATTTGATGAAGAAGGAGGAAAGAAACCATCAGTTTGACTTTCTGCGACCACAGCATTCGCTGTTCCAGTACTTCACGAGGCTATTGGAGCAGTACACTAAGGTATTGCTGCCGCCAAAGGAATTAGTGTCAAAATTAGGAGCGGAGATTCGCAGCGGAGTGCTGGAGCAGGCTCGCAGTAGAGCCGCGTGGCATTCGCACCAGGCGCGGAGGAAGGCGGCCGATGAAGCCAAGATAGAAAAAGAGAGACTCGCCTACGCTTCTATAGACTGGCACGACTTCGTAGTAGTGGAGACTGTGGACTATCCCGCGGGAGAACCGGGCGACTTCCCTCCGCCGACCACTCCGCTGGAAGTAGGAGCGAGGGTACTGGCCCAGGAACGAGGAGACGACATCATACAACCTAACGAGGAAGACGACACGGAGATGCAGCTGGAGTCGGAATCAGAGTCCGAATCGGACGAGGACCTGGCCGAGATGGAGGACAGGACGCACCAGCAACAACGACCCGACGACAACAGGGTCCAGGACATGGAGGAGGAGTCCTCGTCAGACGACGACGGACCTCCCGAGGCCCGCGCCGGTGAGGAGGCTCCCATGCCACCGCGGCCGGATCGCGTAGTTGTTAAGAAGTACGACCCGAAACGCGCTAGACCGCAACCAGCTCCCGCTAGCGAGGAATGGCTGGTGTCGCCCATCACAGGAGAGAAGATCCCCGCGAACAAGGTGACGGACCACGTGCGTATCGGATTGCTCGACCCTCGCTGGCTGGAACAGAGAGACCGCGCTGCAGCGGAGCGCTCAGATAGAGACGAAGCCCTTGCCCCCGGGGCGGCTATTGAAGCGTCGCTTAAACAGTTGGCCGAGCGTCGTACTGACATCTTCGGTGTTGGAGACGAGGAGACAGCCATCGGTAAGAAGATAGGAGAAGAGGAGAAAAGACGCGACGAGAGAGTCACCTGGGACGGACACACGTCCAGCGTAGAGGCTGCGACCAGGGCGGCGCGGGCTCACATCACACTGGAAGACCAGATACAACAGATACATAAGGTCAAAGGTCTTCTACCTGATGAGGAAAAAGAGAAGATCGGTCCCAAGCCGGTGCCGCCAGGTCGTGTGGGGGTTGCGATCAGACCGCCTCCTCCGCCCGCCCAGCCAAGAGTACAACCTCCAGCCGCCCCCGCGCCCGCCCCCGTCTTGCTACAACCTATACCACCACTGATGGTAATACCACCAATGGCACCACGACCACCGCTGATAGCCACCCAAGTCGCCACTCCCTATGGGTACCCCGTCCCGGGAGTGCCCGCAGTCCCGGGGGTTCCGGGAGTCCAAGATGATGAAGAGCCTACAGCCAAGAGACCGAGGACTGAAGACGCTCTCGAACCAGAACAAGCGTGGCTTGCTTCTCACCCTGGATCTGTACCTATACAGGTGTCGGTGCCGATGGCCCCCGAGCGTTCCGAGTGGCGTCTGGACGGGCGGACGCTGTCCCTGTCCCTGCCCCTGGCGGCTCCGGTCTCTGAACTCAAAGCATCACTACAGCGAACCACTAACATGCCCACCGCTAAACAGAAGCTCTACTATGAGGGTCTATTCTTCAAGGACACCAACACCCTGGCGTACTACAACGTGCCTCCCGGAGCCGTCATACAGCTGCAGATCAAGGAGCGCGGAGGAAGGAAGAAGTAG

Protein sequence:

>DPOGS204107-PA
MPPGQQHEGLPEEPQAPPPPVIGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVKEIREGKGDSIGPAPVAAVQRPGLAPATAARQQELLKAAAPLEPPPPRDPPPDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLEQYTKVLLPPKELVSKLGAEIRSGVLEQARSRAAWHSHQARRKAADEAKIEKERLAYASIDWHDFVVVETVDYPAGEPGDFPPPTTPLEVGARVLAQERGDDIIQPNEEDDTEMQLESESESESDEDLAEMEDRTHQQQRPDDNRVQDMEEESSSDDDGPPEARAGEEAPMPPRPDRVVVKKYDPKRARPQPAPASEEWLVSPITGEKIPANKVTDHVRIGLLDPRWLEQRDRAAAERSDRDEALAPGAAIEASLKQLAERRTDIFGVGDEETAIGKKIGEEEKRRDERVTWDGHTSSVEAATRAARAHITLEDQIQQIHKVKGLLPDEEKEKIGPKPVPPGRVGVAIRPPPPPAQPRVQPPAAPAPAPVLLQPIPPLMVIPPMAPRPPLIATQVATPYGYPVPGVPAVPGVPGVQDDEEPTAKRPRTEDALEPEQAWLASHPGSVPIQVSVPMAPERSEWRLDGRTLSLSLPLAAPVSELKASLQRTTNMPTAKQKLYYEGLFFKDTNTLAYYNVPPGAVIQLQIKERGGRKK-