| DPOGS204137 | ||
|---|---|---|
| Transcript | DPOGS204137-TA | 360 bp |
| Protein | DPOGS204137-PA | 119 aa |
| Genomic position | DPSCF300184 + 279564-281414 | |
| RNAseq coverage | 954x (Rank: top 13%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012926 | 4e-64 | 96.64% | |
| Bombyx | BGIBMGA013623-TA | 4e-43 | 93.02% | |
| Drosophila | Elongin-B-PA | 3e-42 | 66.67% | |
| EBI UniRef50 | UniRef50_B4K8E8 | 3e-40 | 66.38% | GI22177 n=20 Tax=Arthropoda RepID=B4K8E8_DROMO |
| NCBI RefSeq | XP_623908.1 | 4e-47 | 76.52% | PREDICTED: similar to Elongin B CG4204-PA [Apis mellifera] |
| NCBI nr blastp | gi|66507736 | 1e-45 | 76.52% | PREDICTED: transcription elongation factor B polypeptide 2 [Apis mellifera] |
| NCBI nr blastx | gi|66507736 | 8e-45 | 76.52% | PREDICTED: transcription elongation factor B polypeptide 2 [Apis mellifera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 5.2e-08 | protein binding | |
| KEGG pathway | ame:551511 | 1e-46 | ||
| K03873 (TCEB2) | maps-> | Pathways in cancer | ||
| Ubiquitin mediated proteolysis | ||||
| Renal cell carcinoma | ||||
| InterPro domain | [11-65] IPR000626 | 5.2e-08 | Ubiquitin | |
| Orthology group | MCL14204 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204137-TA
ATGGATGTCTTTCTTATGATTAGGCGAAAAAAACTTACCATCTTTACGGATGCCAAAGATACAACAACTGTTTTGGAATTGAAGAAAATGATAGAGGGCATCTTGAAAGTAGCTCCTCCGAGTCAAATGCTTTTTAACAAGGATAGCCAGCTCATGGACGATGACAAAACTCTGGCAGAGTACGGTCTTACTTCAGCCACTGCCAAAGCTCAATGCCCGGCACCAATTGGACTTGCTTTAAGAAAAGAGAATGGTGAATTTGAGGCTCTAGAACTGACTCCGTACTCGTCTCCCCCGGACCTGCCTGATGTTATGAAATCCCAGGAGACAAATGGACAGGAACAGATGGATCAACACTAA
>DPOGS204137-PA
MDVFLMIRRKKLTIFTDAKDTTTVLELKKMIEGILKVAPPSQMLFNKDSQLMDDDKTLAEYGLTSATAKAQCPAPIGLALRKENGEFEALELTPYSSPPDLPDVMKSQETNGQEQMDQH-