| DPOGS204162 | ||
|---|---|---|
| Transcript | DPOGS204162-TA | 561 bp |
| Protein | DPOGS204162-PA | 186 aa |
| Genomic position | DPSCF300034 - 515173-516841 | |
| RNAseq coverage | 0x (Rank: top 96%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009910 | 1e-40 | 67.13% | |
| Bombyx | BGIBMGA005045-TA | 3e-27 | 50.24% | |
| Drosophila | lms-PA | 3e-08 | 42.86% | |
| EBI UniRef50 | UniRef50_UPI00020613EA | 2e-10 | 45.35% | UPI00020613EA related cluster n=1 Tax=unknown RepID=UPI00020613EA |
| NCBI RefSeq | XP_001641601.1 | 1e-10 | 44.62% | predicted protein [Nematostella vectensis] |
| NCBI nr blastp | gi|328709550 | 8e-10 | 45.35% | PREDICTED: homeobox protein MSX-1-like [Acyrthosiphon pisum] |
| NCBI nr blastx | gi|189239026 | 7e-13 | 48.19% | PREDICTED: similar to CG15696 CG15696-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 4.4e-19 | DNA binding | |
| GO:0006355 | 4.4e-19 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 1.9e-17 | sequence-specific DNA binding | ||
| GO:0003700 | 1.9e-17 | sequence-specific DNA binding transcription factor activity | ||
| GO:0005515 | 1.1e-16 | protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [29-102] IPR012287 | 4.4e-19 | Homeodomain-related | |
| [45-101] IPR001356 | 1.9e-17 | Homeobox | ||
| [28-101] IPR009057 | 1.1e-16 | Homeodomain-like | ||
| Orthology group | MCL25095 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204162-TA
ATGAATTTAACCCCCATCCAATCCGGTTCCAAGTGTAGTTCAGATTTTAGTATAGAGAGGATTTTAAGTGAGGATAAAAGACGCAATACATCATCAGGTTCATCAAACGCCTGCCGCAGTCGCCGCTCTGGTCGTCATGCACGAGTGCCATTCACAGCGACACAGGCGGCGGCTTTAGAGGCCGCCTACACCAGGTCTCCTTACCTCGCCCCACCCGCGCTTAGGGCTCTGGCAGCGGCTTTACAGCTACGAGACGATAGGATAAAAATATGGTTTCAAAATCGACGAGCCCGCGAGCGGAGGGAAAGGACTGGAAATTTAAGTCCACCGAAAGCGGTGACTTTGCCCTCAACAAATTTAAAACCGATTCAACAGAATGAAATTTGGTCAACACATCAAAATCACCAAAACTTTGAATTTGTAAAATCGGAACATGTAAGCGGCTTTGAAAGAACAAACGAAGACACATCGCTACCTAGAGATAGCCGTTCGTCTGTAAGCAGTATTTCAGACGACGAGTCGAGTGCAAGCAGCTTGGATATAGAGACCGTGAACGATTGA
>DPOGS204162-PA
MNLTPIQSGSKCSSDFSIERILSEDKRRNTSSGSSNACRSRRSGRHARVPFTATQAAALEAAYTRSPYLAPPALRALAAALQLRDDRIKIWFQNRRARERRERTGNLSPPKAVTLPSTNLKPIQQNEIWSTHQNHQNFEFVKSEHVSGFERTNEDTSLPRDSRSSVSSISDDESSASSLDIETVND-