DPOGS204191 | ||
---|---|---|
Transcript | DPOGS204191-TA | 609 bp |
Protein | DPOGS204191-PA | 202 aa |
Genomic position | DPSCF300034 + 473485-476144 | |
RNAseq coverage | 2167x (Rank: top 6%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL016934 | 2e-89 | 84.34% |   |
Bombyx | BGIBMGA005115-TA | 1e-110 | 92.57% |   |
Drosophila | Rab1-PA | 2e-102 | 84.16% |   |
EBI UniRef50 | UniRef50_P33723 | 5e-87 | 74.75% | GTP-binding protein ypt1 n=6 Tax=leotiomyceta RepID=YPT1_NEUCR |
NCBI RefSeq | NP_001037010.1 | 4e-109 | 92.57% | small GTP-binding protein [Bombyx mori] |
NCBI nr blastp | gi|112983246 | 7e-108 | 92.57% | small GTP-binding protein [Bombyx mori] |
NCBI nr blastx | gi|112983246 | 6e-105 | 92.57% | small GTP-binding protein [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0007264 | 3.7e-104 | small GTPase mediated signal transduction | |
GO:0005525 | 3.7e-104 | GTP binding | ||
GO:0015031 | 3.7e-104 | protein transport | ||
GO:0016020 | 3.6e-34 | membrane | ||
GO:0007165 | 3.6e-34 | signal transduction | ||
GO:0006184 | 3.6e-34 | GTP catabolic process | ||
GO:0003924 | 3.6e-34 | GTPase activity | ||
GO:0005622 | 3.2e-15 | intracellular | ||
GO:0006886 | 3.4e-05 | intracellular protein transport | ||
GO:0006913 | 3.4e-05 | nucleocytoplasmic transport | ||
KEGG pathway |   | |||
InterPro domain | [9-172] IPR003579 | 3.7e-104 | Small GTPase superfamily, Rab type | |
[10-170] IPR001806 | 9.6e-66 | Small GTPase superfamily | ||
[6-172] IPR020849 | 3.6e-34 | Small GTPase superfamily, Ras type | ||
[7-165] IPR005225 | 2.8e-33 | Small GTP-binding protein domain | ||
[11-170] IPR003578 | 3.2e-15 | Small GTPase superfamily, Rho type | ||
Orthology group | MCL12456 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS204191-TA
ATGAATCCAGAATACGACTACTTGTTTAAACTACTCTTGATTGGAGACTCAGGTGTCGGCAAGTCCTGTCTGTTGCTTCGATTTGCTGATGATACGTATACAGAGAGCTACATCAGTACTATTGGTGTGGACTTTAAAATTAGGACTTTAGATTTAGATGGAAAGACAATAAAGTTACAAATATGGGACACGGCAGGACAAGAGAGATTCAGAACAATCACATCGTCCTACTACAGAGGGGCACATGGAATCATTATTGTATATGACTGTACAGATCAGGATTCCTTCAGCAATGTGAAACAGTGGTTGGAAGAGATTGACCGTTATGCCTGTGACAGTGTCAACAAGCTACTGGTCGGCAACAAATGTGACCTCACCACCAAGAAAGCGGTTGATTATACCACTGCTAAGCAATATGCAGAGCAGTTGGGTATCCCGTTCCTGGAGACATCGGCCAAGAACTCAACGAATGTTGAACAAGCGTTCATGACTATGGCCGCTGAGATAAAGGCTCGTGTTGGCCCGCCTTCAGCCGGCGCGCCCGCCGCCGCCGCTGTCAAGATAGATCAAGGACGTCCCATCGACACTAACAGGACCTCCTGTTGCTGA
>DPOGS204191-PA
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDSVNKLLVGNKCDLTTKKAVDYTTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSAGAPAAAAVKIDQGRPIDTNRTSCC-