| DPOGS204197 | ||
|---|---|---|
| Transcript | DPOGS204197-TA | 267 bp |
| Protein | DPOGS204197-PA | 88 aa |
| Genomic position | DPSCF300034 + 535792-536124 | |
| RNAseq coverage | 3x (Rank: top 90%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009905 | 4e-36 | 78.16% | |
| Bombyx | BGIBMGA005157-TA | 2e-12 | 54.72% | |
| Drosophila | CG5285-PA | 7e-08 | 33.75% | |
| EBI UniRef50 | UniRef50_E2BD37 | 3e-14 | 44.05% | Single-strand selective monofunctional uracil DNA glycosylase n=2 Tax=Endopterygota RepID=E2BD37_HARSA |
| NCBI RefSeq | XP_001600856.1 | 4e-15 | 49.40% | PREDICTED: similar to single-strand selective monofunctional uracil DNA glycosylase [Nasonia vitripennis] |
| NCBI nr blastp | gi|307209294 | 1e-13 | 44.05% | Single-strand selective monofunctional uracil DNA glycosylase [Harpegnathos saltator] |
| NCBI nr blastx | gi|383859425 | 7e-13 | 44.19% | PREDICTED: single-strand selective monofunctional uracil DNA glycosylase-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | nvi:100116331 | 1e-14 | ||
| K10800 (SMUG1) | maps-> | Base excision repair | ||
| InterPro domain | [3-86] IPR005122 | 2.8e-17 | Uracil-DNA glycosylase-like | |
| Orthology group | MCL13297 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204197-TA
GTTTCAGAAATGGAGCCGTTATATAAAATCTGTGATCCAACATTTGTTCAGGTTTTAAAATTATATGAAGTAGAAATTGTTGTGGCTATAGGTAAATTTTGTGAAACGAGAGCTCAGAAAGCTATAAAAAAATACTTGCCAACAAGTTCCATCAAGGTTGTACTTTACTTATCTCATCCCAGCCCAAGGACTGTAAATAACAATAACTGGGAAGAAAAGGCAATGGAACAATTAAAAAACTTGGGACTTTTGGAATATTACACTTAA
>DPOGS204197-PA
VSEMEPLYKICDPTFVQVLKLYEVEIVVAIGKFCETRAQKAIKKYLPTSSIKVVLYLSHPSPRTVNNNNWEEKAMEQLKNLGLLEYYT-