DPOGS204199 | ||
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Transcript | DPOGS204199-TA | 474 bp |
Protein | DPOGS204199-PA | 157 aa |
Genomic position | DPSCF300034 + 544503-546240 | |
RNAseq coverage | 442x (Rank: top 28%) |
Annotation | ||||
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Heliconius | HMEL009900 | 7e-64 | 94.02% |   |
Bombyx | BGIBMGA005158-TA | 2e-60 | 88.43% |   |
Drosophila | CG6196-PA | 5e-58 | 63.06% |   |
EBI UniRef50 | UniRef50_B0WF96 | 1e-65 | 73.25% | Trafficking protein particle complex subunit 6B n=3 Tax=Culicidae RepID=B0WF96_CULQU |
NCBI RefSeq | NP_001040487.1 | 2e-82 | 91.19% | trafficking protein particle complex 6b [Bombyx mori] |
NCBI nr blastp | gi|114052647 | 4e-81 | 91.19% | trafficking protein particle complex 6b [Bombyx mori] |
NCBI nr blastx | gi|114052647 | 2e-79 | 89.94% | trafficking protein particle complex 6b [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005488 | 1.1e-32 | binding | |
KEGG pathway |   | |||
InterPro domain | [6-156] IPR007194 | 7.5e-42 | Transport protein particle (TRAPP) component | |
[2-156] IPR024096 | 1.1e-32 | NO signalling/Golgi transport ligand-binding domain | ||
Orthology group | MCL15702 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204199-TA
ATGGCTGATGATATTGTTTTTGAATTATTACATTCAGAAATAATTAACTACTCTCTAGAGCAGAATAAAAGTAGCAATGGTAAGGAGGTCGATTTATCCGTCGTGGAGTATATTGGTTTTGCGGCTGGTTACAAAATTATGGAAAGGTTGACTAGAGAATGGCCAAGATTTAAGGATGAGTTAGACACAATGAAGTTTATATGTACCGATTTCTGGACGTGTATTTATAAGAAACAGATTGATAATCTCAGAACAAACCACCAAGGGGTATATGTTCTTCAAGATAATGCATTCAGATTTCTTATAAACTTTTCTAGCGGCCAACAGTATTTGGAATATGCACCTAGGTACGTAGCCTACACTTGTGGTCTTATCAGAGGTGGTCTGGCTAATTTGTGTATCAACAGTATAGTCACAGCAGAAGTGCAGACAATGCCTTCCTGTAAATTTCACATTCATGTTCAGAGATCGTAA
>DPOGS204199-PA
MADDIVFELLHSEIINYSLEQNKSSNGKEVDLSVVEYIGFAAGYKIMERLTREWPRFKDELDTMKFICTDFWTCIYKKQIDNLRTNHQGVYVLQDNAFRFLINFSSGQQYLEYAPRYVAYTCGLIRGGLANLCINSIVTAEVQTMPSCKFHIHVQRS-