| DPOGS204201 | ||
|---|---|---|
| Transcript | DPOGS204201-TA | 324 bp |
| Protein | DPOGS204201-PA | 107 aa |
| Genomic position | DPSCF300034 + 567368-567870 | |
| RNAseq coverage | 843x (Rank: top 15%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL021611 | 2e-44 | 87.74% | |
| Bombyx | BGIBMGA005159-TA | 2e-37 | 80.95% | |
| Drosophila | Srp14-PB | 5e-20 | 46.81% | |
| EBI UniRef50 | UniRef50_P37108 | 1e-23 | 55.21% | Signal recognition particle 14 kDa protein n=54 Tax=Tetrapoda RepID=SRP14_HUMAN |
| NCBI RefSeq | NP_001091775.1 | 3e-40 | 81.52% | signal recognition particle 14 kDa protein-like protein [Bombyx mori] |
| NCBI nr blastp | gi|148298791 | 8e-39 | 81.52% | signal recognition particle 14 kDa protein-like protein [Bombyx mori] |
| NCBI nr blastx | gi|148298791 | 5e-43 | 82.86% | signal recognition particle 14 kDa protein-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006614 | 7.8e-38 | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0045900 | 7.8e-38 | negative regulation of translational elongation | ||
| GO:0048500 | 7.8e-38 | signal recognition particle | ||
| GO:0008312 | 7.8e-38 | 7S RNA binding | ||
| GO:0005786 | 4.7e-31 | signal recognition particle, endoplasmic reticulum targeting | ||
| GO:0030942 | 4.7e-31 | endoplasmic reticulum signal peptide binding | ||
| KEGG pathway | ame:552323 | 3e-25 | ||
| K03104 (SRP14) | maps-> | Protein export | ||
| InterPro domain | [1-105] IPR009018 | 7.8e-38 | Signal recognition particle, SRP9/SRP14 subunit | |
| [1-108] IPR003210 | 4.7e-31 | Signal recognition particle, SRP14 subunit | ||
| Orthology group | MCL13524 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204201-TA
ATGGTCTTATTAGGAAATGATGAGTTTTTGATTGAACTTTCAAAGTTATTTCAAAAAGCTAGGGCATCAGGTTCTATCTCTATGACTATGAAAAGATATGATGGGAGGACTAAGCCTGTATCTCGAGATGGAACACCTGCTATCAAAGACCCACAGTATAAATGCCTTGTTAGAGCTCAATCAGGAAGCAAGAAAATTTCAACTGTTATTGAACAGCGGGATGTTGAAAAATTTACAATGGCATACTCTAATCTTCTTAAAACTAGTGTAAATGGTTTAAAACGTTTAAAGAAGCCTAAGAAGAAGGCAATAGCAGCAAATTAA
>DPOGS204201-PA
MVLLGNDEFLIELSKLFQKARASGSISMTMKRYDGRTKPVSRDGTPAIKDPQYKCLVRAQSGSKKISTVIEQRDVEKFTMAYSNLLKTSVNGLKRLKKPKKKAIAAN-