Monarch geneset OGS2.0

DPOGS204270
TranscriptDPOGS204270-TA4248 bp
ProteinDPOGS204270-PA1415 aa
Genomic positionDPSCF300046 - 66305-84733
RNAseq coverage492x (Rank: top 25%)
Annotation
HeliconiusHMEL0033140.091.63% 
BombyxBGIBMGA007540-TA0.077.92% 
DrosophilaGap1-PB0.046.13% 
EBI UniRef50UniRef50_P484230.046.13%GTPase-activating protein n=8 Tax=Drosophila RepID=GAP1_DROME
NCBI RefSeqNP_524014.20.046.13%GTPase-activating protein 1, isoform A [Drosophila melanogaster]
NCBI nr blastpgi|1575660.046.13%GTPase-activating protein [Drosophila melanogaster]
NCBI nr blastxgi|1984669020.045.32%GA19811 [Drosophila pseudoobscura pseudoobscura]
Group
Gene OntologyGO:00056229.1e-118intracellular
GO:00510569.1e-118regulation of small GTPase mediated signal transduction
GO:00050969.1e-118GTPase activator activity
GO:00071651.6e-75signal transduction
GO:00055157e-26protein binding
KEGG pathwaydme:Dmel_CG67210.0 
 K12380 (RASA3)maps-> MAPK signaling pathway - fly
InterPro domain[390-732] IPR0019369.1e-118Ras GTPase-activating protein
[410-743] IPR0089361.6e-75Rho GTPase activation protein
[12-150] IPR0089737e-26C2 calcium/lipid-binding domain, CaLB
[694-840] IPR0119938e-22Pleckstrin homology-type
[13-113] IPR0000083e-18C2 calcium-dependent membrane targeting
[695-812] IPR0018492.4e-12Pleckstrin homology domain
Orthology groupMCL12054 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204270-TA
ATGGCGGACGAAACGCGTAAAGTGCGAGTAGAAGAAAGATTGAAAATTAAGATTGGTGAAGCTAAGAATCTACCAGCTCGCAACAATGGCGCCGCCTCCCACCGAGATATATACTGCGTGCTGTCACTCGACCAAGAAGAGATATTCCGAACATCCACAATGGAAAGAACACTTGACCCATTTTTCGGTGAGGAATTCCAGTTCGAGGTGCCGCGTCGGTTCAGATATCTTTCCATATACGTGTTCGATCGCGACAAACATCTCAAGCAGGACAAGGTGCTCGGGAAGGTCGCTATCAAACGTGAGGATCTCCAGAGGTACAATAACAAGGACCACTGGTTCGCTCTGCGACCAGTCGACGCGGATTCCGAGGTGCAAGGGAAGGCATATATCGAACTCACACTCGAGGATTCCAGGAAACGTCTGCGCATGGACCCCAAACCACCGGACTTGGACCCCGCGGACAACGGCTCGACGAAGACGAAAGCCAATAATTTAACTAGGTTATCAGAATATTGTAAAGAGAGCATTAGATTCGGTTCGGGTTCGAGCACGAACAGGAAGAATCTACTAAGTCCGGTGTCGACTGAACCTTCGCTGGCTCTTTCCCGATCGGAGAGTCTGAAGGACCGAGCTCAGTGGGCAGTGAGGACGAAACCGCCCATGCATGCCATGTCCGAGTCGGACACGTCACCCACACCCACCGCCGCCGACTACTGGTCGGACCCCGAGAGACACTGCGCTGCGAGAGTGGGCCCCGACACTCTGCGGCTTCGAGTGCTGGAGTGCTCTGAACTCACAACCAAAAACGGCCAGTGCGACCCCTTCGCTCTCGTCACACTACTGTACTCGAACGGCCGGAGAGTCGAGAGGCGCACTAAACCCAAGAAGAAAACCGTCAACCCTCAGTTTGATGAAATCTTCTGTTTTGATCTCGTGATGGAGGCTGATCCGAAGGACAAGGATGGTTCACAAACGGCCGGCGTAGCTTGTGAAGCGAGAGTGTCAGTGTGGCACGACGGAACCACACCAGTATTTCTAGGCGAAGTTAGGTTGCAGTTACGGCAGCCGGCGCCATCACCTCTATGTGCCTGGTACTTCCTAACGTCTCGCGCGGGCGGAGCCCTATCCCGCGGCGCGACGCCCCCCGGGACTCGACTCTCAGCCGCTGGCAGCCCAACTCTGGGTTCCCTGCGGCTGCTACTCCAGTACACCGTGGATCACGTGTTCCCATTGCACCACTACACTCAGCTCGAGGACCTGTTTCTCAGGAGCGTACATCAGAAGCCCATAACGACATCAGCCGTGTACATCCTGGGCGAGATCGTGTCCAGCAAGACGGACGCCGCCCAGCCTCTGGTGCGGCTCTTCACGCATCACGACCTCATAGTGCCCATCGTCAAGGAGCTGGCCGACGCTGAAATATCAGTACTCACAGACGCGACGACGATATTCCGCGGGAACACTCTCGTGTCCAAGATGATGGACGAGGCGATGCGTCTGACGGGCGCGTCCTACCTCCGCGGCGTGCTGAGGCCCACGCTGGCCGCCGTGCTCGCCGAGCGGAAGCCGTGCGAGATAGACCCCGCCAGGGTCAAGCCGGCCGCCGCCGTAGCCACCAACCTCGCCAACCTCAAGGATTACGTCGAAAGGGTGTTCTCAGCCATCACGGAGTCGTACGCGCAGTGCCCCGCCGGCATGTGTCGCCTGTTCGACGCCCTCCGGCAGTGCGCCGCCCGTCACTTCCCCGCCAACGCCGAGGTCCGCTACTCGGTCGTCTCCGGGTTCATATTCCTGAGGTTCTTCGCCCCCGCAATACTCGGACCTAAGCTCTTCGATCTTACCACTGAACAAATTGATCCACAAACAAACCGCACGCTAACCCTGATCTCCAAGACCATCCAGTCCCTCGGGAACCTGGTGAGCAGTCGCTCCGCCCAGCAGGTCTGTAAGGAGGAGTACATGGCGGAACTGTACCGCAGCTTCTGTACAACAAGACATGTACAGGCTATCAAACAGTTCCTCGAGATAATCTCAACCAGCTCGGACACACAGAACAATAACGTCCAAGAGACACCAGTTCTGCTCAAAGAGGGTACGATGATCAAGCGGTCGGAGGGGGTGCGGGCGGGGGCGGGCTCTCCGCGGAGACGGTGGGCGCGCTCCGCACACCCGCACTGCAAACGGAGGCACTTCCGGTTGACGAGCGGTGAGTTGTCGTGGTCTCGGTGCGGCGCGCGGTCCGGTGCTCACCGCCTGGCGCTGTCCGGTGTCCTGAGCGTGTCGCCCGTGGACTGCCCGCCGGCCGGGGCGCCGCTCGACGCTAATAACATCTTCCAAATAGTGCACCGCGAGCGTGTGTTGTTCGTACAGGCGAGTAACTGCGTGGAGCGAGCTGAGTGGCTCAGGCTACTCTCGGCGCTGTGTCGACACTCGCCCACCGCACACCATCGAGGGTACTATGGAGATAACAGGTGGACGTGTTGTGGTCGTACTGAAGCGGACGCTGAGGGTTGTGGCAGCGGCAGCGCTGCTCTAGCGCTGCGGTTAGACCCGGCGAGGGACTTACAGCGGCTGCATGCGCTCCTCGTCGCTCACGTGCAGCGGCTGGAGGAGCGACTCCATCGACCACCAGACGACACGAGCCCTGAGGAGCGGGAAGCGGAGGCGGTGACGTTACGGGAGCTGGAGAAGATAATGTTCGACCTTGAACATCGACACTGTATATACAGACGATCCTTGGCCAGGGAGACGAAGTATGGAAGCAAACAAGCTCCTATCGGCGATGACAACTATCTTCACCTCGCCGGAGCGGCCGGGAGCGTGGACAGTGGGTCATTTTTCTTCCGAACGTGGAGAGGTGACTCGTCCCCAACGATCGATCTCGACGGGAAGACGCTCCCGCTACAATCATCACACGACATCTGCTCCAGTACGGAGTCCTTAAAACTGGCTCGGCACGGCGACGAGCGGTCCTCTGGCAAATCGAATAAGTCTACCGGCAGCGGGTACCTCACTATGTCGTGTATCAAACACGAGCCGTCTGAAGATAGCGACGCCTCCAACGACAGGCCGACACGACCGCCCAAGCCCGCGCGACTGTCACCCTTCCGCGCGCCCCTCGCATGTCCCCCCGCTCCTCTCTCCGAGTACGTCGACGTCGAGCTTAAGCCCCCTGTACGAAGACCGAAGCCTGAGCCCACGCCGCCCAGGAGGCCCGACCACGATATATCGAACCGCTGTAAGGAATACGAATTGATGGCTAACTTCATGAGCCACTCCCAGACGTCGGACGACGACGCGCCGCCGGCGGTCCCGCCGCGCGGTCAGACGATATCTCGAGTGCGTTTGCAGCCCAAACCCACTGACATAGATGTCACGAAGTCGGACGAACACGTTACGTTTCGGCAGAAACCGGCGAGCGGCTCCACGGCCAGCCTGCCGCGAGGATCGTCAGCGGAGGAAACCAGGAATCTCTCGGACGGCGAGGACGGTCGACCGCCCAGCAAAATAGACACCGTCTCCAACGACGACAGTCTCCTCGACGAACTACAGAGGGACACTTACTGCGTACTGAAAGTGTGCGAAGACGAGGCTCCGGTCGACGACGACTACCAGAATGCCAAGACCGAAGAGACGCAAGGAGGCAAAGACAAAGAGGAGTACGGCATGTTCTCGAGGATCAGTCTGCAGAGGAAATCGAACCCTATCAAGACACAGCCGAGCTCCATGAAACCGTTAAAAACTTCCAATTCCACGTCGAACGTCCAAGACGCCGGCACACATTCCTCCAGGCCGCTCACCGAACGACTGACTCCGTTTTTTCTGAAGAAGAAGCCGAAAACGTCGGAGGACTCGAGCAAGCCGCGGAAAGAGGACAATTTAATCGGCCGGTTGACGCCGCGGTTCGGCCAGTCGCGGCTGTACGGGCGCGGACAGTCGCTGGAGCTGGTGCCGCCGGAGACTCGTCCGAGACGCATAGAACGTTCCGCCACCACCGTCACCATCCCCACGCGACCCATCAACTCCTCCATAGTGGCCAACCTGAAGTTTCTGACGCTGCATCGTTACGGAGCGACGGACGAAGTGCAGTGCCACGCGTTCGTTCGCAGCGGAGAGGAACCCGGCGCCGGCGTGGGCGGCGTGGGTGGCGTGAGCGACGTGAGCGCGCCCACGGAATCTGAAGACGATTCGTGGCGCCGCGTCGGCGGCCCGCTCCTGACCGCCACTAGCGACATCCGCCTCTAG

Protein sequence:

>DPOGS204270-PA
MADETRKVRVEERLKIKIGEAKNLPARNNGAASHRDIYCVLSLDQEEIFRTSTMERTLDPFFGEEFQFEVPRRFRYLSIYVFDRDKHLKQDKVLGKVAIKREDLQRYNNKDHWFALRPVDADSEVQGKAYIELTLEDSRKRLRMDPKPPDLDPADNGSTKTKANNLTRLSEYCKESIRFGSGSSTNRKNLLSPVSTEPSLALSRSESLKDRAQWAVRTKPPMHAMSESDTSPTPTAADYWSDPERHCAARVGPDTLRLRVLECSELTTKNGQCDPFALVTLLYSNGRRVERRTKPKKKTVNPQFDEIFCFDLVMEADPKDKDGSQTAGVACEARVSVWHDGTTPVFLGEVRLQLRQPAPSPLCAWYFLTSRAGGALSRGATPPGTRLSAAGSPTLGSLRLLLQYTVDHVFPLHHYTQLEDLFLRSVHQKPITTSAVYILGEIVSSKTDAAQPLVRLFTHHDLIVPIVKELADAEISVLTDATTIFRGNTLVSKMMDEAMRLTGASYLRGVLRPTLAAVLAERKPCEIDPARVKPAAAVATNLANLKDYVERVFSAITESYAQCPAGMCRLFDALRQCAARHFPANAEVRYSVVSGFIFLRFFAPAILGPKLFDLTTEQIDPQTNRTLTLISKTIQSLGNLVSSRSAQQVCKEEYMAELYRSFCTTRHVQAIKQFLEIISTSSDTQNNNVQETPVLLKEGTMIKRSEGVRAGAGSPRRRWARSAHPHCKRRHFRLTSGELSWSRCGARSGAHRLALSGVLSVSPVDCPPAGAPLDANNIFQIVHRERVLFVQASNCVERAEWLRLLSALCRHSPTAHHRGYYGDNRWTCCGRTEADAEGCGSGSAALALRLDPARDLQRLHALLVAHVQRLEERLHRPPDDTSPEEREAEAVTLRELEKIMFDLEHRHCIYRRSLARETKYGSKQAPIGDDNYLHLAGAAGSVDSGSFFFRTWRGDSSPTIDLDGKTLPLQSSHDICSSTESLKLARHGDERSSGKSNKSTGSGYLTMSCIKHEPSEDSDASNDRPTRPPKPARLSPFRAPLACPPAPLSEYVDVELKPPVRRPKPEPTPPRRPDHDISNRCKEYELMANFMSHSQTSDDDAPPAVPPRGQTISRVRLQPKPTDIDVTKSDEHVTFRQKPASGSTASLPRGSSAEETRNLSDGEDGRPPSKIDTVSNDDSLLDELQRDTYCVLKVCEDEAPVDDDYQNAKTEETQGGKDKEEYGMFSRISLQRKSNPIKTQPSSMKPLKTSNSTSNVQDAGTHSSRPLTERLTPFFLKKKPKTSEDSSKPRKEDNLIGRLTPRFGQSRLYGRGQSLELVPPETRPRRIERSATTVTIPTRPINSSIVANLKFLTLHRYGATDEVQCHAFVRSGEEPGAGVGGVGGVSDVSAPTESEDDSWRRVGGPLLTATSDIRL-