| DPOGS204315 | ||
|---|---|---|
| Transcript | DPOGS204315-TA | 456 bp |
| Protein | DPOGS204315-PA | 151 aa |
| Genomic position | DPSCF300046 + 717219-718046 | |
| RNAseq coverage | 771x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015143 | 3e-68 | 92.96% | |
| Bombyx | BGIBMGA007585-TA | 3e-74 | 94.70% | |
| Drosophila | Cbp20-PA | 4e-72 | 79.47% | |
| EBI UniRef50 | UniRef50_P52298 | 2e-61 | 77.30% | Nuclear cap-binding protein subunit 2 n=101 Tax=Eukaryota RepID=NCBP2_HUMAN |
| NCBI RefSeq | NP_001037598.1 | 2e-72 | 94.04% | nuclear cap-binding protein subunit 2 [Bombyx mori] |
| NCBI nr blastp | gi|112983130 | 4e-71 | 94.04% | nuclear cap-binding protein subunit 2 [Bombyx mori] |
| NCBI nr blastx | gi|112983130 | 1e-80 | 94.04% | nuclear cap-binding protein subunit 2 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 3e-23 | nucleic acid binding | |
| GO:0000166 | 7.3e-23 | nucleotide binding | ||
| KEGG pathway | dmo:Dmoj_GI23717 | 7e-72 | ||
| K12883 (NCBP2, CBP20) | maps-> | Spliceosome | ||
| InterPro domain | [31-104] IPR000504 | 3e-23 | RNA recognition motif domain | |
| [9-106] IPR012677 | 7.3e-23 | Nucleotide-binding, alpha-beta plait | ||
| Orthology group | MCL13745 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204315-TA
ATGAATTCCTCTATAGAAATTAGTTCATACCGAGATCAGCATTTTAAGGGATCAAGAACAGAACAAGAGAAATTATTAAGGGCATCATCTACACTGTACATAGGAAACTTATCGTTCTACACAACTGAGGAGCAGATATATGAATTATTCTCACGTTGCGGTGATATACGAAGAGTCATAATGGGATTGGATAAATATAAAAAAACTCCATGTGGATTTTGTTTTCTAGAATATTATACGAGGCCAGATGCAGAGGACTGCATGAGATATATAAATGGCACAAGACTGGATGATAGGATTATAAGATGTGATTGGGATGCTGGGTTTATTGAAGGCAGACAATATGGAAGAGGGAAGACTGGTGGACAGGTTCGTGATGAATACCGTACCGACTATGATGGCGGTCGTGGCGGTTATGGGAAAATAATTGCGCAGAAAATTGTACCAAATACATAA
>DPOGS204315-PA
MNSSIEISSYRDQHFKGSRTEQEKLLRASSTLYIGNLSFYTTEEQIYELFSRCGDIRRVIMGLDKYKKTPCGFCFLEYYTRPDAEDCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVRDEYRTDYDGGRGGYGKIIAQKIVPNT-