Monarch geneset OGS2.0

DPOGS204413
TranscriptDPOGS204413-TA4071 bp
ProteinDPOGS204413-PA1356 aa
Genomic positionDPSCF300002 - 620822-631043
RNAseq coverage246x (Rank: top 42%)
Annotation
HeliconiusHMEL0062660.068.81% 
BombyxBGIBMGA007718-TA0.068.78% 
Drosophilafbl6-PA3e-10237.39% 
EBI UniRef50UniRef50_Q7Q5H72e-11140.66%AGAP006431-PA n=4 Tax=Culicidae RepID=Q7Q5H7_ANOGA
NCBI RefSeqXP_001656868.18e-11440.03%hypothetical protein AaeL_AAEL013568 [Aedes aegypti]
NCBI nr blastpgi|1571365292e-11240.03%hypothetical protein AaeL_AAEL013568 [Aedes aegypti]
NCBI nr blastxgi|1571365295e-11240.03%hypothetical protein AaeL_AAEL013568 [Aedes aegypti]
Group
KEGG pathway 
InterPro domain[355-465] IPR0223642.9e-09F-box domain, Skp2-like
Orthology groupMCL16241 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204413-TA
ATGTCGGGCCGTTCGAGTCCCGTAAACGGCGGCTACGATGCTGCTGAGCCTGCTATGAGGCTCTCGGTACGCAAGGATCTCTTTCCAGAAATTCGCTTGCTGAAAGGAACCTCCGTTTCAGATACAGAATCTGAGACTGCACAAGACGAGCTCGAAGCTGTATCTTGTGTTAAACTGGAGACTGACTTCGAGAAGAGCATTGATGACATTGCTCAACAGAAGATGCAGGTGGTTAATGGAGCGCTGCCGTCCCCGACACGGCCTCGCCACAGGAAACATAAGCAGCACTCCAAACGTGATTCAGACTATACGACTCATAATGGGTGTCCACCTAAGGAGAAGAAGAGGAAAAAGAGTTCTCATGACTCTCGTAAATGGACACCTTCAAAAAATAGTATAGTGACGAAAGTGAAAGGTGGCAAAAACTTAAACTTAGTGAGTAGTAGTGAGTATCAGGATGATGATGAAGGTGAAGTAGAAGAAGATGAAAGTGATAGTTCTGAAGATGAAGTGTTAAAGAGTAGTGTAAAGTTACCGTTAATATCACGACAAAGTGGTAAACCTTACAGTCATGAACTTAGTCAATTATCAACAAAAAAGAGTAAATCTAAGGAATCATCAAAGGAACAAAGGACTCGTATAGTGATACCTTGTAGTGGTAAACCTCGTTCCATGTTGGGATTCTGTAGCTCCCGAAGCAAAAAGAAATCCAAGAAGTCTGAAGTCACTCCCCCCACATATCAAAGCCAGATAGTGGATACTAGTACTAAACTAAAGATTAAAATTAGAAGGACAAGCATTCAGGATGTGATAACTCCAGCTCCAGTATCAATAGCTGATATCGGTCAAAGGAGGTCCAAGAAGAAGCGAGCGGTCTCACCTGCGGCTAGTGCTAGTTCTGGTGAGGAATATGATCCCACGCGGGGTGACACGGCCGCCGTCATGAGTGTCGCAGCTACAAAATCAAGGCAACCAAGGGCGAAGGTCAAAAAGTCCAATAATAATAACTCAAAAACTAAAGATAAAGCTCAAAAGACTGAAAGAACTAGAGGTAGTGCTGTGGATAAAGGGAGTAAACCACAAAGTCCGTGGGCACATTCCATGCCTGAGGAGTTATTAGTGAAAATATTTGAATATGTTGTACAGCAGGGTAGCTTACCTGGTATTGTAAGATTGAGCAGGGTTTGTAAATTATGGCACACTGTCAGCTGTAGGCCGGAGTTGTGGAAGAATGTGGACCTTGCACAATATACTGTTGAAAAATGTAAAACTGACTACAAACTGGTCTGGCTTCTCGAAAATCGTTTATCTCTTTGTCACAGTTTAAATATTGCTCAATGGAAGGTGTGTAATGTATCGTGGGTGTTAGCATGCGTGGTGGACTACTGCCCCGGTCTGGTCGAGCTGAGTGTGGCTGGCTGGAGTCGTATCACACCAGATCAGCTGTTCGACCTTCTACAGGGACTCCCACAACTGCAACGACTAGATCTCTCTTTGACGTCTGAGACTGGTGGTTCCAGTACTTGTCTCTCAGCAGCGTCTATGGCTCGCATCGCCAGCAACTTCGGCGATCGTCTGACACACCTCACACTAGCTAACAATAAGTTCTCTGCTCTACCGCAAATACTATCATCAGTGGCTGCTCACTGTCCGAATCTCGAAGTGTTAGATATATCAGGGGCCTTGGCGACGTCACATCCGGCGCCCATACCCCTGGAGGCGTTGCAGAAAGGATGTCCTAAAATGAGAGTCTTCAGAGCGGCGAACGCTCAGCTAGTACTGGCCTCAGCTACAACGTCACAACAGATGGAAGCCGGAGGTTGGAGTTTGCTTGAGGAGGTATCAGTGGCGTGTAGTGCTGCTGAGGAAAGAACCGCGGTAGGCGAGTACCGGCTAGGAGACGAGGCCCTCGGCCGGCTAGTGAGAGCTGCTACTAGATTAAGACTGCTGGACCTGCGAGGCCTGCAGCGACTCACCGACTCAGGTCTCGTGCGGGTGCCCGCATGGGACCTTCAGCATTTATTCCTAGGAGGTTGTAATGTGCTCCGTCAAACAAACGCGTGTCTGGAGTTGATCTGTGAGAAGTGGTCTCACAGTTTGCTAGAATTGGACCTGTCGTGGGCGTCCGCCGCTAAGGTGCTCCACGACGCCGTGTGCGCACTCGCTGATGCACCAAGTAGCAAACTAAGAATACTCAATTTATGTGGATCATCGGTTTCTTTTGAGGCCGTCAAAAAAGTGCTGTTAAAGTGTCCCCACCTAGAGTCTTTAAATCTAAGTTCATGTCGGGCTTTGCCAAGAGGCATGAAACGTCTTTATACAGGAAAAGAACTTCAAGACCTGAAAGATAGTTTAGACCCGGAAAAAGTAAAGACCAAAGAGAACAAAAGTGAGGAATCAAAGAAGAAGAAGACAAAGGCTGATTCAAAATGTGATGATAAAAAGGCTTCCCCTAAAGACGATACCTCCGAAAGTTCAGGTAGCAAAAGTGTTATAAAATCTACAGATAAGTCTTCCGCGGGTGTATTTCAAGAACCGAAAAGTGTTTCCGATTCAGGCAATATGTCCGACAAACGTACGTCTAACGATACACCAATTAAGTCTTCTCCTAGCAATAAGATTCTAGAACAGTCGAAAAATATTTTAGAAAATGATACATCGTATCTACTTTCTAGAGGCTCGACCACTCCCAATTTGTCTAGCCCCCTCGCTCAATCGAAGCCAGATTCTTCTTCGACTCCACGGTCGGAACCAACTAAGTCTGATATAGGTAGTCCTCACTTTAGTCCAGTCCAAAAACCTGATAGTCAAGTCCCTAGTAGTCCTGATATCCAACGTGATTCGGTTAAAAGTAACCACTCATGGAGTCTGGGACAGTTTAAAAGCACACCCACTCAAAAGTCTGAGGCGAGTCCAATCAATCGGTTAGATAGTCATTCGAAATTAAGACATAGCAAAATAGTAGAGCAATGTAGTCCAACAACTTCTTTAGAGAACAAGCCGAGTCCGGAGACATTAGGTATGAAACATAAAGAGCAAGATATAAAACATCCTAATAATTGGAATTATGGTAGCTATAGCCCCATGCCACGACAGGACAGCCAGTTTTCATCTCAAAGGAGTCCTTACTCAGCTCAACCGAGTCCTGCTCAGCCCAGTCCGTACTCGACCCAGCCCAGCCCCTACTCCACACAGCCCAGTCCATATTCGTCTCAACCTAGCCCTTACTCTGCTCAACCGAGCCCCGACACCAGTCAAATAGTTAAAGCGGAACACCAAAAGACGGGCGGGTGGAACACCGGCAATTTTAGTCCAATGCCAAAACACCACGCGCCCTTCTCACCACATCCCTCCACACACACCAGTCCAGATCCCGGCCTGGCCGTTAAAAATGATGGTCTTCGAAATAACCCTAACAAAACGCCCGGTCAGTATAGTCCAATGTCACGACAGCAACACCAGAGTCCATATTCACCTAGACCGAGTGTGGAAAATAACTACAACAACAAAAAAAGTCCGGGAGTAGGCAAGTACAGCCCTATGATGAGACCTGACTGTCATTTACCGAGCCCGGATGGAGGTCACGTCTCTCGACCGCATCTGAGTGGACGAACGCAGGATATGTACGGACGGCAAGTGTCCAAGGTCACCGAAGTTCCACAGAGTGTCCCACCGCCTGAAATACCGAACTCGTGGGGTTTCAACCACATGGGTACACCAACGTCCGCTATCGACTCTCTCGTCTGGGGGAGCGGTTCGTTCAACACGGAGCCGGCGCTGCAGTCGCCCATGTCCCAGTCGCGCGACAACGTGTCCACGATGCTCAACACGCCGCCTCCCCAACCTTGGAACGACCTAACCCCTTTCGATAGCACTCTACGAAGGTCCACCGACCCTAGTGACCCATGGACGTTCGGACAGTTCCGAGTGGAGCCACCGAATCAATTGCACAATACTTTCGTAGAGCAAACCGTGAGCTTCGATTCTTTGAGTGGCCATCTTGGTCATCCGTCGCATACGCTCCAGAGTTACTTGGAGGATAGCTTCTCTGAGCCTTCGCGAGTGGACTGA

Protein sequence:

>DPOGS204413-PA
MSGRSSPVNGGYDAAEPAMRLSVRKDLFPEIRLLKGTSVSDTESETAQDELEAVSCVKLETDFEKSIDDIAQQKMQVVNGALPSPTRPRHRKHKQHSKRDSDYTTHNGCPPKEKKRKKSSHDSRKWTPSKNSIVTKVKGGKNLNLVSSSEYQDDDEGEVEEDESDSSEDEVLKSSVKLPLISRQSGKPYSHELSQLSTKKSKSKESSKEQRTRIVIPCSGKPRSMLGFCSSRSKKKSKKSEVTPPTYQSQIVDTSTKLKIKIRRTSIQDVITPAPVSIADIGQRRSKKKRAVSPAASASSGEEYDPTRGDTAAVMSVAATKSRQPRAKVKKSNNNNSKTKDKAQKTERTRGSAVDKGSKPQSPWAHSMPEELLVKIFEYVVQQGSLPGIVRLSRVCKLWHTVSCRPELWKNVDLAQYTVEKCKTDYKLVWLLENRLSLCHSLNIAQWKVCNVSWVLACVVDYCPGLVELSVAGWSRITPDQLFDLLQGLPQLQRLDLSLTSETGGSSTCLSAASMARIASNFGDRLTHLTLANNKFSALPQILSSVAAHCPNLEVLDISGALATSHPAPIPLEALQKGCPKMRVFRAANAQLVLASATTSQQMEAGGWSLLEEVSVACSAAEERTAVGEYRLGDEALGRLVRAATRLRLLDLRGLQRLTDSGLVRVPAWDLQHLFLGGCNVLRQTNACLELICEKWSHSLLELDLSWASAAKVLHDAVCALADAPSSKLRILNLCGSSVSFEAVKKVLLKCPHLESLNLSSCRALPRGMKRLYTGKELQDLKDSLDPEKVKTKENKSEESKKKKTKADSKCDDKKASPKDDTSESSGSKSVIKSTDKSSAGVFQEPKSVSDSGNMSDKRTSNDTPIKSSPSNKILEQSKNILENDTSYLLSRGSTTPNLSSPLAQSKPDSSSTPRSEPTKSDIGSPHFSPVQKPDSQVPSSPDIQRDSVKSNHSWSLGQFKSTPTQKSEASPINRLDSHSKLRHSKIVEQCSPTTSLENKPSPETLGMKHKEQDIKHPNNWNYGSYSPMPRQDSQFSSQRSPYSAQPSPAQPSPYSTQPSPYSTQPSPYSSQPSPYSAQPSPDTSQIVKAEHQKTGGWNTGNFSPMPKHHAPFSPHPSTHTSPDPGLAVKNDGLRNNPNKTPGQYSPMSRQQHQSPYSPRPSVENNYNNKKSPGVGKYSPMMRPDCHLPSPDGGHVSRPHLSGRTQDMYGRQVSKVTEVPQSVPPPEIPNSWGFNHMGTPTSAIDSLVWGSGSFNTEPALQSPMSQSRDNVSTMLNTPPPQPWNDLTPFDSTLRRSTDPSDPWTFGQFRVEPPNQLHNTFVEQTVSFDSLSGHLGHPSHTLQSYLEDSFSEPSRVD-