| DPOGS204444 | ||
|---|---|---|
| Transcript | DPOGS204444-TA | 657 bp |
| Protein | DPOGS204444-PA | 218 aa |
| Genomic position | DPSCF300002 + 45440-54170 | |
| RNAseq coverage | 88x (Rank: top 63%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017406 | 3e-67 | 90.00% | |
| Bombyx | BGIBMGA013642-TA | 5e-78 | 78.53% | |
| Drosophila | CG31106-PB | 1e-29 | 33.16% | |
| EBI UniRef50 | UniRef50_D3TPI2 | 3e-37 | 42.35% | Synaptic vesicle transporter sVOP n=2 Tax=Diptera RepID=D3TPI2_GLOMM |
| NCBI RefSeq | XP_001865146.1 | 1e-37 | 41.08% | synaptic vesicle protein [Culex quinquefasciatus] |
| NCBI nr blastp | gi|37142938 | 3e-38 | 45.73% | SV2-like protein 1 [Ctenocephalides felis] |
| NCBI nr blastx | gi|37142938 | 2e-38 | 45.73% | SV2-like protein 1 [Ctenocephalides felis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0055085 | 1.2e-20 | transmembrane transport | |
| GO:0016021 | 1.2e-20 | integral to membrane | ||
| KEGG pathway | ame:724429 | 8e-27 | ||
| K06258 (SV2) | maps-> | ECM-receptor interaction | ||
| InterPro domain | [1-211] IPR016196 | 1.2e-34 | Major facilitator superfamily domain, general substrate transporter | |
| [76-211] IPR011701 | 1.2e-20 | Major facilitator superfamily | ||
| Orthology group | MCL22329 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204444-TA
ATGGATAATAGTGATAACAGCTCGTCAGAGAGGAGCCTGGAGAGGTTGACAGAAATAAAAGCATTCATTGAGGCTAGTAAGAAAACTAATGAAAAAGCCGAAGAGCTTCAGGTCGATGCTGATAAAAGCCTGTCAAAGCTTAACGAAGTCGTCTTTGACGATGCTTTCGAATTAACCGGTCACGGCAAGTTTAATCACATAGTGCTGATGACCTGTGGTCTTATTATGCTGAACGTGTCCATGGAGTCCGTCGGCATGAGCTACGTGATCACGGCAGCTGAGTGCGAGCTTGGATTAACGTCCGAGCACAAGGGCCTGATCAATGCGGCAGCTTTCATTGGTATAATAAGCACGTCGTTCCTGTGGGGCTACCTCGGGGATCGTTGTGGAAGGCGCGCTGTTATGTTGCCAGCTATGGTTGCTTCAGCTGTCTTCTCGATAGCTTCCTCGTTTTCCACCAACGTCTGGATGCTGCTAGTTTTGAGATTCTTCACTGGATGCCTAGTGTCAGCCTCCAGCGCGACCGTGTATGCGTATCTCGGTGAGATGCACACGGGCTCCCGGCGTGCGGCCGCGATCGCTTGGGGTTCAGCCTTCATATCTTTCTCCTTTATGATATTGCCAGTAATTGGTTTCGACATCATGTACGCCAATTAA
>DPOGS204444-PA
MDNSDNSSSERSLERLTEIKAFIEASKKTNEKAEELQVDADKSLSKLNEVVFDDAFELTGHGKFNHIVLMTCGLIMLNVSMESVGMSYVITAAECELGLTSEHKGLINAAAFIGIISTSFLWGYLGDRCGRRAVMLPAMVASAVFSIASSFSTNVWMLLVLRFFTGCLVSASSATVYAYLGEMHTGSRRAAAIAWGSAFISFSFMILPVIGFDIMYAN-