| DPOGS204489 | ||
|---|---|---|
| Transcript | DPOGS204489-TA | 582 bp |
| Protein | DPOGS204489-PA | 193 aa |
| Genomic position | DPSCF300002 + 1188207-1211076 | |
| RNAseq coverage | 77x (Rank: top 65%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015696 | 8e-86 | 90.59% | |
| Bombyx | BGIBMGA007832-TA | 2e-31 | 95.16% | |
| Drosophila | sick-PB | 1e-35 | 53.90% | |
| EBI UniRef50 | UniRef50_D6X3K7 | 2e-36 | 62.28% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6X3K7_TRICA |
| NCBI RefSeq | XP_001974204.1 | 1e-34 | 53.90% | GG21210 [Drosophila erecta] |
| NCBI nr blastp | gi|270001186 | 7e-36 | 62.28% | hypothetical protein TcasGA2_TC016081 [Tribolium castaneum] |
| NCBI nr blastx | gi|270001186 | 1e-34 | 62.93% | hypothetical protein TcasGA2_TC016081 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3.4e-20 | protein binding | |
| KEGG pathway | ||||
| InterPro domain | [28-172] IPR001715 | 3.4e-20 | Calponin homology domain | |
| Orthology group | MCL18862 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204489-TA
ATGATACCGACTTGCATCAGAGCCCCTCGGTCCATTCAGGGCTCTACTGATGACGTCACACGGCAGACGAGGTCCATTGTTCAGATTTACACTGACTGGGCCAATCACTACCTGGAACGAGCCAGATCACGGCGTAGAGTGGGCACTTCTGGAGGAGGCCTAGCTAGAGACTGCGCTGATGGCCTACTTTTGGCCGATGTTTTAGAAGGAGTAACAGGTCTCAAGGTGCCACGTGCTCATCGAAAGCCAAGAAATCCACAACAAATGTTGGAGAACGTGCAGTGTTGTTTGGACTTTCTACATACACAAAAAGTCCAGGGCTTAGAACAAGTAACAGCTGTTGACATACGAGACGCGAAATTAAAAGCTGTGTTAGCTTTATTTTTTGCTCTGAGTCGACATAAACAAGCTTCAAAACAACGAACGCCATCTACCGGCAATGCAACAAACGTGGGGAGAAGTTCAAGCGAAGACGTGTCTTTGAGTTCCGTCCAACGCATAACAGGTGGCAGCAGCTGCGATGAAATATTGACTGCTTGCGGAAATAACATCGACATGACGACTTTAACAGCTAATAGGTAA
>DPOGS204489-PA
MIPTCIRAPRSIQGSTDDVTRQTRSIVQIYTDWANHYLERARSRRRVGTSGGGLARDCADGLLLADVLEGVTGLKVPRAHRKPRNPQQMLENVQCCLDFLHTQKVQGLEQVTAVDIRDAKLKAVLALFFALSRHKQASKQRTPSTGNATNVGRSSSEDVSLSSVQRITGGSSCDEILTACGNNIDMTTLTANR-