DPOGS204510 | ||
---|---|---|
Transcript | DPOGS204510-TA | 588 bp |
Protein | DPOGS204510-PA | 195 aa |
Genomic position | DPSCF300205 - 171889-172476 | |
RNAseq coverage | 307x (Rank: top 37%) |
Annotation | ||||
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Heliconius | HMEL008903 | 2e-59 | 54.24% |   |
Bombyx | BGIBMGA008238-TA | 4e-09 | 26.32% |   |
Drosophila | plexA-PA | 1e-08 | 25.00% |   |
EBI UniRef50 | UniRef50_B0WHF6 | 1e-08 | 27.06% | Plexin-A2 n=1 Tax=Culex quinquefasciatus RepID=B0WHF6_CULQU |
NCBI RefSeq | XP_970548.1 | 2e-10 | 27.42% | PREDICTED: similar to plexin A CG11081-PA [Tribolium castaneum] |
NCBI nr blastp | gi|321470214 | 1e-10 | 29.24% | hypothetical protein DAPPUDRAFT_317955 [Daphnia pulex] |
NCBI nr blastx | gi|321470214 | 8e-13 | 29.24% | hypothetical protein DAPPUDRAFT_317955 [Daphnia pulex] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016020 | 9.6e-05 | membrane | |
KEGG pathway | tca:659123 | 7e-10 |   | |
  | K06820 (PLXNA) | maps-> | Axon guidance | |
Orthology group | MCL34553 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204510-TA
ATGCCTAATCTAGGTGTAGCTGCAATCATCGTCTGCAGTTTACTTAAAGTCAGTTCAGCGGGTGACATACTTGTGCAAACAAATGAAGATCAATGCACAGCCTTCACCTCGTGCACATCATGTATTACCCAAGGAGTATGTACTTGGTGCATTACAAAGAGTCTTTGCACTCGACAGCAGTGCGGCAATGACAACATTATATATCCGAAGAATTCACAGGCTCTGTTAACTGGAGCAGAATTCTGCCCACGGATAGTTGAATCGCCTGAACGCATCTTCAAACATAGCCAAGTACATATATTTGTTGTGAAATTAACACAAATCTATGTTTACATGGCGTTCACGCCTTGGCAGTGTAAGATTCGTGTTGGTGATCAAGATTTTGAGATAAAAGGGATATTGTTAGGTGATTCCGTTTACTGTGATGCATTTGAAATGAAAAACGAATCCGACCAAGCTTACATAGAAGGTAATGTGAAAGTTTTATGGAACTTTAAGAAGGCTTTCGATGGATCTCTTTCATTTAAAATATGCCGATGTGATTTAGAACCAAATTGTTTAGCTTGCACCAAAAATAAATCAAAATAA
>DPOGS204510-PA
MPNLGVAAIIVCSLLKVSSAGDILVQTNEDQCTAFTSCTSCITQGVCTWCITKSLCTRQQCGNDNIIYPKNSQALLTGAEFCPRIVESPERIFKHSQVHIFVVKLTQIYVYMAFTPWQCKIRVGDQDFEIKGILLGDSVYCDAFEMKNESDQAYIEGNVKVLWNFKKAFDGSLSFKICRCDLEPNCLACTKNKSK-