| DPOGS204537 | ||
|---|---|---|
| Transcript | DPOGS204537-TA | 267 bp |
| Protein | DPOGS204537-PA | 88 aa |
| Genomic position | DPSCF300297 - 223354-224419 | |
| RNAseq coverage | 0x (Rank: top 96%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016573 | 8e-48 | 98.82% | |
| Bombyx | % | |||
| Drosophila | CG11985-PA | 5e-43 | 90.59% | |
| EBI UniRef50 | UniRef50_B7QIF0 | 9e-38 | 82.56% | Pre-mRNA splicing factor SF3B 10 kDa subunit, putative n=15 Tax=root RepID=B7QIF0_IXOSC |
| NCBI RefSeq | XP_002069726.1 | 8e-42 | 91.76% | GK11422 [Drosophila willistoni] |
| NCBI nr blastp | gi|68051667 | 6e-41 | 88.64% | IP03424p [Drosophila melanogaster] |
| NCBI nr blastx | gi|68051667 | 3e-40 | 88.64% | IP03424p [Drosophila melanogaster] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | dwi:Dwil_GK11422 | 2e-41 | ||
| K12832 (SF3B5, SF3B10) | maps-> | Spliceosome | ||
| InterPro domain | [1-88] IPR009846 | 1.3e-66 | Splicing factor 3B subunit 5/RDS3 complex subunit 10 | |
| [1-89] IPR017089 | 5.3e-58 | Splicing factor 3B, subunit 5 | ||
| Orthology group | MCL14541 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204537-TA
ATGAGCGCAATGGGTGAAAGATACAATATACACAGCCAGCTAGAACATTTACAGAGCAAGTACATAGGAACCGGGCATGCTGATACCACGAAGTACGAGTGGCTTACGAACCAGCATCGAGACTCATGTTGCAGCTACATGGGGCATCCGGATATACTGAGTTACTTTGCTATAGTTGAAAACGAGTCCAAAGCGAGGGTGAAGTTCAATTTGATGGAGAGAATGCTCCAACCTTGCGGTCCACCGCCGGAGAAACCGGAAGATTGA
>DPOGS204537-PA
MSAMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLTNQHRDSCCSYMGHPDILSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED-