Monarch geneset OGS2.0

DPOGS204613
TranscriptDPOGS204613-TA6159 bp
ProteinDPOGS204613-PA2052 aa
Genomic positionDPSCF300432 - 69828-90599
RNAseq coverage1895x (Rank: top 7%)
Annotation
HeliconiusHMEL0101490.072.57% 
BombyxBGIBMGA012171-TA0.064.45% 
Drosophilakst-PE0.042.54% 
EBI UniRef50UniRef50_B0WRM40.043.44%Spectrin alpha chain n=3 Tax=Eukaryota RepID=B0WRM4_CULQU
NCBI RefSeqXP_001606391.10.045.53%PREDICTED: similar to beta chain spectrin [Nasonia vitripennis]
NCBI nr blastpgi|3504076510.045.21%PREDICTED: spectrin beta chain, brain 4-like [Bombus impatiens]
NCBI nr blastxgi|3504076510.044.19%PREDICTED: spectrin beta chain, brain 4-like [Bombus impatiens]
Group
Gene OntologyGO:00055151.4e-21protein binding
KEGG pathway 
InterPro domain[1198-1298] IPR0181593.6e-25Spectrin/alpha-actinin
[1196-1297] IPR0020171.4e-21Spectrin repeat
[1708-1807] IPR0119936.3e-20Pleckstrin homology-type
[1707-1726] IPR0016052.6e-18Spectrin/pleckstrin-like
[1705-1814] IPR0018492e-11Pleckstrin homology domain
Orthology groupMCL10058 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204613-TA
CGAGTCCTGGCAGCGTCTGGTGGAACAGATCCAGTCTCGGAGCCAGCGCCTCGCGGCGGCCGGGGAGATCCACCGCTTCCACCGCGACGCCGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGCGCCGCCACCGCCCTCCTCAGGGACCACGACGCCGCGGAGAACGACATGGTCGCCATAGACGCGCAGATGCAGGTGCTCCAAGAGGAGGGATCTCGTCTCCAGCGGCTGTGCCCCGGCGGCAACTCCCAGCAGATAGCGCTGCGTCAACAGGCGCTCAGTGAAGCGTGGCGGTCACTGCGCGGCGCCGCAGACCTCAGGAGGAAACTGCTGCACCAACACCTGGAACTGCAGACCTTCCTGTCCGCGGAGATCGAAGAGCGGTGTCGTGCGGTGGTGGAGGAGCGCGGTCGCCTGGCGAACTCCTGGGCTGCGCGGCAGGTGGCCCTGGACCAGCTGATCGACTGGCACTGCTTCCTAAGGGACGCCAAGCAGTTGCACGCTCTGTGTGCTGCACAGGAAGCAGCACTCGGCAGCGAAATATCTCCGACCAGCAGCGTGGAGGAGGTGGAACACCAGCTCAAGAAGCACGAGGCCTTCGAGAAACTGCTGGCGACGCAGGACGAGAAGCTGTCCACCCTGAACAGCCACGGAGACAAGCTGTTGCAGCAGAACCACGTGGAGAGCGCCCGCATACAGGAAGAGCTGGCCGCTGTCAACGATCGTAGGAAGAAGCTGTACGTGGCCGTGGGTGTCCGTCGCGGAGCCTTACTCCGAGCGCGCGCCCGGGCTCAGTTCACGAGAGACGCCGCTGAAGCCAGGAGTTGGGTGGCCGACAAGATGGCGCAGCTGCAGCTCATCACTGGTGAAGTGACGGACCTGGAAGACAAGATCAAGAAGCTGCAGAGACACCAGGCGTTCACTGCTGAGCTGGCAGCGAACAGGGCGCGGCTGGAGGAGGTCGGGCAGCTGGCCAAGGAGCTGGAACCAGACAGGGAGGTGGCCAAGGAGCTGGAGCAGCTGGAACGAGAGTGGAGGACGCTGGAGGACGCCGCAGAACAAAGAGGTCGCGGGTTAGAGGAGGCCCAGGACATTCTGGAGTTCAACCAGCACCTGGACAAAATAGAAGCCTGGATACGTGACAAGGAACTGATGGTCCAAGCCAACGAGACCGGCCGTGATTACGAGCACTGCACCGCCCTGCTGCGTAAGCTGGATGACCTGGACAGCGACATGAAGGTAGACGACAAACACGTCAAGAGCGTCCAGGCGTTGGCTGACAAGCTGTTGCAGCAGGGTCCAACACAACACGCTGCCAACGTCGCCGCCCGGCGTGACGGAGTGCTGCTCAAGTGGCGCGCGCTCACTGGAGCGCTGCAGCGCTACAGGGAGAGGCTGGCGGCAGCGCTGCAGCTACACTCCTTCAACAGGGACGTCCAAGAGACATCGGAGCGTTTGTCCCGCAAGGCAGCCCTGTTCCGCAGCGAGGAGTGCGGCCGGGACCTCAGCGCGGCCCACGAGCTGCGCAGACGCCTCGACGCGGCGGTCCGGGAAGCCGGGACCATAAGGGACAGGATACACCAGCTGAAGAACGACGGTTCAGCGCTGGCGAGGAGTCATCCTGAACAGCGAGAGATAATCGAGTCCCAGCTGTCGCAGCTGGACGAAGGCTGGGAACAGCTGCAAAAGCTGGCGGCCGCGCGCTCCGACATGCTGGACGACGCCGTCAAGGAACACAAGTTCGAAGAAAACCTTAAGGAGTTGGAGGTCTGGGTGACGGAGACGGTGAAGCGCCTGGACCGCGCGGAGCCCGACAGCGTCACGGACGCTCAGGCACAGCTGGAACACCTGCACGAGACCAAGGCGGAGATAGACGGTCGCCAGAAGGCTATATCATCACTCCAGAAGGAAGCTGAGCAGGCCCAGGAGTTGGAGAAGGTGAAGCGTGTGGAGAAGCTGGCAGCTGGACTGGACCAGGCCTGGCTACAGAGGAAACAGTATCTCACGCAGGCCCACTCACTGCAAGTGCTGAAGGAACAGGCCCAGGCCGTCGAGGACTGGCTCGCTGGGAAAGAGGCCTTCCTCCACAACGACGACCTCGGAGACAGCCTCGACGCTGTTGAGACACTGATCCGCAAGCACGGCGAGTTCTCCAAACTGCTGGAATCCCAGATGGGCAAGGTGCTGGAGCTGGAGAAGTACGCCGAGTCCATATCGGAGGGGCACTACAATAGAGACTACATAATGAGGAGGGTGGCTGCCGTGAGGGCGAGGGCGGACCAGCTCAAGCTGTCGTGCGTGTCACGGGCCGAGCGTCTGCAGCAGGCGTTGCAGCTGCAGCAGCTGCTGAGGGACGTGACACACGCGAGGGAGTGGATCGACCTCAAGATGCAGATCGCCAACGACGCTAACTACAGGGAGCTGTCGAACCTGCAAAGCAAGATACAGAAGCACACGGCCTTCGAGTCCGAGCTGGCGGCCAACAAGAAGCGGATCGACGACGTGGCTACAGCTGGGGAGGACCTCATCGAATTTATCTCATGTTTCCCACATTGTCTCCAGTCCGCGTCCAAACTACGTAGGTCCCGGCTGCAGGAGGCTTACCAGGCGCGCGTGTACCTCCGGGGGCTGGACGACTTCACCGCCTGGCTTGATGACGTGGAGGCACAGCTGCTTAGCGAGGATCACGGTAAAGACCTCTCATCAGTGTCGGCGCTGCTGAAGCGTCACTCTCGTCTGGAGGCGGCTGTGGGGGCGAAGGCCGACACCGCGACGCAACTGGCCGACACCGCCAGACATCTCGCAGACAACAAACACTTCATGGCCGACGAGATCCTCGAGAAAGCTGACACTGCTGTCAAGAGATACAAACAATTGCAAGAACCGATGTCCATCAGGCGGGAGAACCTCAAGGACGCTGAATTACTGCACCGCTGGGAGAGAGACGCGCACGAGGAGATGGCCTGGTTAAAAGAGCACGAGGCAGCGGTATGGTCCGAGGAGGCGGGCGGGTCCCTGCCCGAGGCGCAGGCCCTGCTGAAGAAACACCAGGCGCTCGGAGCCGAGCTGGGCGCCAGAGAGGCGACGATCTCTGCGGTGATCAGCCGTGCCAGCGCGCTGTCTCGAAGGGGACACTTCGCCAGCGCTGTGCTCGAGCAACGGAGTCGGGAGCTGAGGGCGGCGCTGAGGACCATCACCGAGAGGGCGGCGCACAGGGAGGCCGCGCTCAGGGAACGATGCGACCTACTACAGCTGCTGAGCGAAATCTGGGAGGCGGAGGCCTGGGTGGCGGAGCGCCGCGGGGCGATCCTCGGCGCTGAGCTGGCTCGGGACGAGGACTCCGCCCTGGCCTTGGCCAGGAGACTGGAAGCCCTGCAGAGGGAACTGCAGGCCTTCCAACCAACCATCGCGAGGATCGAGAAGAACTACCAGGATCGTTCCTACGAAGACGAGCAGGTCCGCCGCAAGCTGGACGAGCTCAAAGCTTCCTACGAGGAGATGAACCTGCTGTCGGCCAAGCGTCAGCAGAGGTTGCAGCAGAGCCTGAAATATTTCAAGTTCGTGCAGGAGTGTGAGGAGGTGCAGGAGTGGATCGGCGAGCAGATGACGGTGGCGGCCAGCGAGGAGTACGGCCTGGACGTGGAGCACGTGGACACGCTGCAGCAGGCCTTCGACTACTTCATGCAGCAGCTGCATGCAAACGAGGGCAGGATCGAGGCGGTCTGCGAGGCGGGGGCGGCACTCCTGGAAGAGAACACGCCAGAGGAGGAAAGAGTGAAGCAGAAGATAGAAGACATAAGAGGACTGTGGGACGACCTCAAGGAGCTGGCTCTGGCTAGGCAGGAGGCGTTGGCTGGTGCGCGTCAAGTCCACGAGTTCGATCGCAGCGCTGAGGAGACGGTGGCCTGGGTCAATGAGAAGGAAGCGGCGCTTGCAGCGCTGTCGTCCCCAGCAGCCTCTCAGTTGCATCAGCTTAAAGCGCTGCGAGCGGAGCTGGGGGCTATCAGAGACCAGCACCAGATGTTGAGAGACAGGGCTTCCAGTCTCGGTGAAGCCTTCCCCGACGCCAAGGAGCACGTGCTGTCTAAGCTGGAGGAGGTGACTGAAGCGCTGGAAGCGCTGGAGGAGAAGGCGGCCCACAGCGAACACCAGCTGGAACTGGCTGATCAGCTTAAAGCGTACTTCGACAAATACCAGGAGCTTATGGCTTGGAACAACGAGACCCTCGCCCGCGTGACCGCTCCCGAGCTGTCTTCTGACGTGGCGGGCGCTGCACGACTGCTGGCCAGACACCAGGACCTCGCCGCTGAGATACACGCCAAGGATGAGAGCTTCCAGACCTTCTATGACGACGGTGAGAAGTTGGTCCGCGAGGGTCACTTTATGTCCCAGGAGGTGGAGACGAGGATGTCGTCTCTGAGGGCTCGTAGGGCTGCGCTGGACCACGCCTGGAGCGCCCGGAACAGGATATACGAGCACCACCTGGACGCACTCATGTTCTTAAGGGACGCTGATGCGCTGGACCGCTGGATATCTTCCAGAGTGCCTCTCGTCCGTGATGGAAAATATGGTGAAAGCCTGGCGCAGACGGAAGAGCTGATCAACAGGCACCGAGACTTGGAGGAGACCATCGACGCGCAGAAGGAGAAGTTCCTCGCACTCAAACGGATCACGCTGATCGAGAAAGCCTTTAAAGATCAGAAGAATGAAGAGGAGGCTGCCCGCAAGCAACACCTGGAGAGACAAGAGGCTGAGAGGATGCAGCTGGTGCGGAAGAGAGAAATGGAGAGGATCGCGGAGGAGCGGCGGAGGGAGACAGAGGAGCAGAGAGGAACTGCTGTACAGGTGGAGCGTCAGTTATCCAGCTCCGGTATGAACAGCAGCCTGGCTGGCTCCGTGGAGGAGACCCTCAGCCCCGCGCCGCAGTTCGACCGCCTCCCGAAACCGGATGTTCACGTCAAGAGAGCTGAGAGCATGAGCGTGGTGAAGACTCCTAAACGGACACCGTCGTTCACGACGCGCAGGCGGACCCAGAGCTTCAGGCGGCACCGGAAACACGATGACCTGCCTCCGGTCGAAATAGAAGGATACTTGGAGCGCAAGCAGGAGGCGGGTTCGGGCGGCGTGAGAGCGGCCGTGAGGAGTTGGAGGTCGTACTACGCCGTGCTGTGCGGTCAACTGCTCTGCTTCTTCAGGGACCAGGAGGATTTCGCCAGCTCCAAGGCCGCGGCGCCACCTGTCGCTATACTCAATGCTCGTTGCACGCCCGCCAGCGACTACACCAAGCGGTCGCACGTGTTCCGTCTGTCGTGCGCTGATGGGGCGGAGTACCTCTTCTCCTGCGGGTCCAGGGACCTGCTCGCGGAGTGGGTCGCCAAGCTAGCCTTCCACGCAGCGCTGCCGCCCCAGCTGCAACTGACGCCCTACAACGCCGAGGAGTCACCTACAGCGGACGTGAGGAGGAGATTGCAGCAGAACGCCTCCTCGTCATCCTCGGCCGCTTCCTCACCGGAACCCCAGCGTCACAGGACCCAGGCCGAGATACTGCAGGAACATCGCACCAGCCAGAAGGAGAGTCAGGCCGGTAGAGAAGATAACAAGAGTCGAGTCTCCGCAGACAGGCATATTGAGTCTACAGTGCTGCCCTCTCTGCCGCCGAGACAGCCGCCGGCAGTGGACGATACTGCAGATGTGGTGCTCAGCCGAGGCCCCGCCGTCGCCCCCCGGCCCGCCCGTGGTCAGGCCCCCCGCGGGGCCCGACAGACCCCCCGCGCTGCCGGAGAGAGACAGGGAGAAGGTGACCAACCTGGTGAACAACTACCAGAGGATGACGAGGAGCTACCAGGAGAGGGACGACCGGAACTGGCAGGAACAGTACGGGGGAGACTCGGCTTACGGAGGCAGCAGTCGACCGTCATCAGTATCTGGAGGGTCACCAGCTCTGGACAACAGACCGGCTTCCAGGTCCTCGGGAGAATCAGAGCTGTCAGTCGGCGGGAAAGAGAAGAAAGACAAGAAGGGAGTGTTCGGTGGACTGTTCAGCAGGAAGAAGAGGCCGCAGAGTCACATGTAGAGGACAGAAGAGAAGATACAGACGATACAAGCATAATAAATATATAA

Protein sequence:

>DPOGS204613-PA
RVLAASGGTDPVSEPAPRGGRGDPPLPPRRRGXXXXXXXXXXXXXXXXXXXXXRAATALLRDHDAAENDMVAIDAQMQVLQEEGSRLQRLCPGGNSQQIALRQQALSEAWRSLRGAADLRRKLLHQHLELQTFLSAEIEERCRAVVEERGRLANSWAARQVALDQLIDWHCFLRDAKQLHALCAAQEAALGSEISPTSSVEEVEHQLKKHEAFEKLLATQDEKLSTLNSHGDKLLQQNHVESARIQEELAAVNDRRKKLYVAVGVRRGALLRARARAQFTRDAAEARSWVADKMAQLQLITGEVTDLEDKIKKLQRHQAFTAELAANRARLEEVGQLAKELEPDREVAKELEQLEREWRTLEDAAEQRGRGLEEAQDILEFNQHLDKIEAWIRDKELMVQANETGRDYEHCTALLRKLDDLDSDMKVDDKHVKSVQALADKLLQQGPTQHAANVAARRDGVLLKWRALTGALQRYRERLAAALQLHSFNRDVQETSERLSRKAALFRSEECGRDLSAAHELRRRLDAAVREAGTIRDRIHQLKNDGSALARSHPEQREIIESQLSQLDEGWEQLQKLAAARSDMLDDAVKEHKFEENLKELEVWVTETVKRLDRAEPDSVTDAQAQLEHLHETKAEIDGRQKAISSLQKEAEQAQELEKVKRVEKLAAGLDQAWLQRKQYLTQAHSLQVLKEQAQAVEDWLAGKEAFLHNDDLGDSLDAVETLIRKHGEFSKLLESQMGKVLELEKYAESISEGHYNRDYIMRRVAAVRARADQLKLSCVSRAERLQQALQLQQLLRDVTHAREWIDLKMQIANDANYRELSNLQSKIQKHTAFESELAANKKRIDDVATAGEDLIEFISCFPHCLQSASKLRRSRLQEAYQARVYLRGLDDFTAWLDDVEAQLLSEDHGKDLSSVSALLKRHSRLEAAVGAKADTATQLADTARHLADNKHFMADEILEKADTAVKRYKQLQEPMSIRRENLKDAELLHRWERDAHEEMAWLKEHEAAVWSEEAGGSLPEAQALLKKHQALGAELGAREATISAVISRASALSRRGHFASAVLEQRSRELRAALRTITERAAHREAALRERCDLLQLLSEIWEAEAWVAERRGAILGAELARDEDSALALARRLEALQRELQAFQPTIARIEKNYQDRSYEDEQVRRKLDELKASYEEMNLLSAKRQQRLQQSLKYFKFVQECEEVQEWIGEQMTVAASEEYGLDVEHVDTLQQAFDYFMQQLHANEGRIEAVCEAGAALLEENTPEEERVKQKIEDIRGLWDDLKELALARQEALAGARQVHEFDRSAEETVAWVNEKEAALAALSSPAASQLHQLKALRAELGAIRDQHQMLRDRASSLGEAFPDAKEHVLSKLEEVTEALEALEEKAAHSEHQLELADQLKAYFDKYQELMAWNNETLARVTAPELSSDVAGAARLLARHQDLAAEIHAKDESFQTFYDDGEKLVREGHFMSQEVETRMSSLRARRAALDHAWSARNRIYEHHLDALMFLRDADALDRWISSRVPLVRDGKYGESLAQTEELINRHRDLEETIDAQKEKFLALKRITLIEKAFKDQKNEEEAARKQHLERQEAERMQLVRKREMERIAEERRRETEEQRGTAVQVERQLSSSGMNSSLAGSVEETLSPAPQFDRLPKPDVHVKRAESMSVVKTPKRTPSFTTRRRTQSFRRHRKHDDLPPVEIEGYLERKQEAGSGGVRAAVRSWRSYYAVLCGQLLCFFRDQEDFASSKAAAPPVAILNARCTPASDYTKRSHVFRLSCADGAEYLFSCGSRDLLAEWVAKLAFHAALPPQLQLTPYNAEESPTADVRRRLQQNASSSSSAASSPEPQRHRTQAEILQEHRTSQKESQAGREDNKSRVSADRHIESTVLPSLPPRQPPAVDDTADVVLSRGPAVAPRPARGQAPRGARQTPRAAGERQGEGDQPGEQLPEDDEELPGEGRPELAGTVRGRLGLRRQQSTVISIWRVTSSGQQTGFQVLGRIRAVSRREREERQEGSVRWTVQQEEEAAESHVEDRREDTDDTSIINI-