DPOGS204621 | ||
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Transcript | DPOGS204621-TA | 576 bp |
Protein | DPOGS204621-PA | 191 aa |
Genomic position | DPSCF300432 + 46102-48029 | |
RNAseq coverage | 236x (Rank: top 43%) |
Annotation | ||||
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Heliconius | HMEL010155 | 7e-55 | 55.85% |   |
Bombyx | BGIBMGA012181-TA | 5e-46 | 44.33% |   |
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_Q5ZLK8 | 4e-23 | 34.95% | UPF0669 protein C6orf120 homolog n=12 Tax=Euteleostomi RepID=CF120_CHICK |
NCBI RefSeq | XP_001600324.1 | 1e-17 | 38.26% | PREDICTED: similar to CG3697-PA [Nasonia vitripennis] |
NCBI nr blastp | gi|327272000 | 7e-23 | 40.25% | PREDICTED: UPF0669 protein C6orf120 homolog [Anolis carolinensis] |
NCBI nr blastx | gi|327272000 | 4e-23 | 37.43% | PREDICTED: UPF0669 protein C6orf120 homolog [Anolis carolinensis] |
Group | ||||
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KEGG pathway | nvi:100115669 | 4e-17 |   | |
  | K10848 (ERCC4, XPF) | maps-> | Nucleotide excision repair | |
Orthology group | MCL18386 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204621-TA
ATGCGAAGGGAATTTATACTTATTTTGTTAGGTATAATAAGCGTTTCCACCCTTTCGTCCTTACTGACGACATATGTTCAAGTGGAAGCGGATAAATTGCTGTTAGACACGGTAGTTGGAGTTGTGGGTGCAGGCAACTTTTCGTATTGGCAATTGGGGCATTCTGGACCCCTTTTAGTAGAACTGACGTCTCTTTCCGGTGATGCAGACCTTTATGTGTCAGATTCACTCAGACCAAGTTACGAGGTCGATAAAAATAACTTCAGCTCAGCGACCTGCGGAGCCGACACTGTCAGTATACCTGCAGAATTCCCAAGACCCATAGGAATCGGTGTGTTTGGCGACTGGTCAAATAAGGTCTCGGAATACAGCATTCAGGTCTTCCTTGATACATCGGTTCTGGTCAGGGACGAGTCCATTGTAGAACATGCTAAGATCAACACTGAAAAAACCGAAGTCCCCACCAAACCTCCCAGCAAGGAGAAGCTGAGTACAAAACGTGGCGATGATGACCGTCCAAGGCTGGTGAAGTTCCTCAGCCTCCTGGACATGATCGTGGAGATGTTCTTCCTGTAG
>DPOGS204621-PA
MRREFILILLGIISVSTLSSLLTTYVQVEADKLLLDTVVGVVGAGNFSYWQLGHSGPLLVELTSLSGDADLYVSDSLRPSYEVDKNNFSSATCGADTVSIPAEFPRPIGIGVFGDWSNKVSEYSIQVFLDTSVLVRDESIVEHAKINTEKTEVPTKPPSKEKLSTKRGDDDRPRLVKFLSLLDMIVEMFFL-