Monarch geneset OGS2.0

DPOGS204681
TranscriptDPOGS204681-TA744 bp
ProteinDPOGS204681-PA247 aa
Genomic positionDPSCF300170 - 13114-17157
RNAseq coverage184x (Rank: top 49%)
Annotation
HeliconiusHMEL0105282e-10576.92% 
BombyxBGIBMGA010251-TA2e-10477.14% 
DrosophilaAtg8a-PA1e-1940.35% 
EBI UniRef50UniRef50_Q1HQ872e-12788.31%Microtubule-associated protein 1 light chain 3 n=19 Tax=Metazoa RepID=Q1HQ87_BOMMO
NCBI RefSeqNP_001040513.14e-12888.31%microtubule-associated protein 1 light chain 3 [Bombyx mori]
NCBI nr blastpgi|1140523686e-12788.31%microtubule-associated protein 1 light chain 3 [Bombyx mori]
NCBI nr blastxgi|1140523681e-12088.31%microtubule-associated protein 1 light chain 3 [Bombyx mori]
Group
KEGG pathway 
InterPro domain[19-143] IPR0042411e-62Light chain 3 (LC3)
Orthology groupMCL12767 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204681-TA
ATGGAGTTAAACTTTATAACCACTCTCATTAAACACGATGTGAATCATAATGTGAAACAGTGTTTTAAGACTAAGAAACCGTTTGTTACTAGAAAAGAAGAAGTAATGGCGATTAAAAGCAAATTCCCAAATAAAATACCGCTCATAGTAGAGAGATACCATAAAGAGAGAGGTCTACCGACTTTGGATAAAACAAAGTTCCTTGTACCAGAAGACATAACAATGTCTCAATTCTTAGTTATAATACGCAACAGAATAAGGATTAAACCAAACCAAGCGCTGTATTTAATAATAAACAACAGGTCTATGCTGAGCATGAGTTTGACTATGTCTCAGGCGTACGAACTCTACGGTGATGAGGATGGATTTTTATATATAACGTATGCATCTCAAGAAGTTTTCGGTTATCAAGATGATATGACGGGGTCTAATAAAGAGGTACAAGTCATTAGAGACCGATTTCCGAATAAAATACCGTTGTACGTGGAAAGATATTCAAGAGAGAAAGAGGTACCGGTCTTAGGTAGGAACAAATTCCTAGTGCCTCAAGAACTCACTATGTCACAGTTCCTCTACATCATTCGGACAAAGATGAAATTGAGAGATTCACAAGCGTTGTATCTGTTGGTGAATGATAAAGTCCTAGTGAGCCACAGTATGACGATGTCGCAGGCATACGAACAGTTCCGTTCCACCGATGGATTCCTTCACATCACCTACGCTGCACAACAGGTATTTGGATGA

Protein sequence:

>DPOGS204681-PA
MELNFITTLIKHDVNHNVKQCFKTKKPFVTRKEEVMAIKSKFPNKIPLIVERYHKERGLPTLDKTKFLVPEDITMSQFLVIIRNRIRIKPNQALYLIINNRSMLSMSLTMSQAYELYGDEDGFLYITYASQEVFGYQDDMTGSNKEVQVIRDRFPNKIPLYVERYSREKEVPVLGRNKFLVPQELTMSQFLYIIRTKMKLRDSQALYLLVNDKVLVSHSMTMSQAYEQFRSTDGFLHITYAAQQVFG-