Monarch geneset OGS2.0

DPOGS204701
TranscriptDPOGS204701-TA621 bp
ProteinDPOGS204701-PA206 aa
Genomic positionDPSCF300170 + 559623-572151
RNAseq coverage976x (Rank: top 13%)
Annotation
HeliconiusHMEL0082217e-7977.50% 
BombyxBGIBMGA007481-TA2e-5453.24% 
DrosophilaCG14968-PC8e-0734.44% 
EBI UniRef50UniRef50_Q7Q4P95e-2641.71%AGAP008521-PA n=3 Tax=Culicidae RepID=Q7Q4P9_ANOGA
NCBI RefSeqXP_316919.21e-2641.71%AGAP008521-PA [Anopheles gambiae str. PEST]
NCBI nr blastpgi|3838654092e-2844.57%PREDICTED: low density lipoprotein receptor adapter protein 1-like [Megachile rotundata]
NCBI nr blastxgi|3838654092e-2843.43%PREDICTED: low density lipoprotein receptor adapter protein 1-like [Megachile rotundata]
Group
Gene OntologyGO:00055157.7e-24protein binding
KEGG pathwayaga:AgaP_AGAP0085213e-26 
 K12474 (LDLRAP1, ARH)maps-> Endocytosis
InterPro domain[30-166] IPR0119937.7e-24Pleckstrin homology-type
[37-162] IPR0060208.4e-14Phosphotyrosine interaction domain
Orthology groupMCL16486 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204701-TA
ATGTTGAAGAACAATTCGAAACACAAAAAACTTTGTGAGGAGTTGGCGCTAGCTGAGTGTGAGGGGGAGGGCTGGTGGAAAGAGGCGCGGGAAGGGAAAGGAAACACAGAGGTCCGGTACGCAGGGGTCGCACCCGTGGAGCGAGCCGCCTCCGCCCCCGCTACCGCTCTTGCTGTGCGCTCGGCCTTACACACGGCGAAAACTATGAACAAAAAGTTGCCGAGAGTGAATTTGGATATCAGTCCTAAGGGTATCCTTGTGTCTGACGCTGAATCACAAGAAGACGTTCTCAGCCTGTCCATTTACAGAATCTCATACTGCTCAGCGGACGCGGCGAACGCTCGTGTGTTCGCAGTGGTAGAAGGCGCGGAAGCCGGAGCGGGCGACGAGCACGCGGTTCACGTGTTCGTGTGCGCTAGACGCAAGCAAGCGCGCACCTTGGCTCTATCGCTGGCACATGCGTTTAATGATGCCTACCAGGCGTGGCAAGCTAACGAAGCGGCATCCTTGAAATCGGGAGGCAAAAGACTAATAACTCCCTGGGTAAATTTCCCCGATGAGTCCGACGAGGATGTTGTAGATCAGTGGGACGCGCCCGCTCCGCTTGTCACTTTCGCTTAA

Protein sequence:

>DPOGS204701-PA
MLKNNSKHKKLCEELALAECEGEGWWKEAREGKGNTEVRYAGVAPVERAASAPATALAVRSALHTAKTMNKKLPRVNLDISPKGILVSDAESQEDVLSLSIYRISYCSADAANARVFAVVEGAEAGAGDEHAVHVFVCARRKQARTLALSLAHAFNDAYQAWQANEAASLKSGGKRLITPWVNFPDESDEDVVDQWDAPAPLVTFA-