DPOGS204701 | ||
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Transcript | DPOGS204701-TA | 621 bp |
Protein | DPOGS204701-PA | 206 aa |
Genomic position | DPSCF300170 + 559623-572151 | |
RNAseq coverage | 976x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL008221 | 7e-79 | 77.50% |   |
Bombyx | BGIBMGA007481-TA | 2e-54 | 53.24% |   |
Drosophila | CG14968-PC | 8e-07 | 34.44% |   |
EBI UniRef50 | UniRef50_Q7Q4P9 | 5e-26 | 41.71% | AGAP008521-PA n=3 Tax=Culicidae RepID=Q7Q4P9_ANOGA |
NCBI RefSeq | XP_316919.2 | 1e-26 | 41.71% | AGAP008521-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|383865409 | 2e-28 | 44.57% | PREDICTED: low density lipoprotein receptor adapter protein 1-like [Megachile rotundata] |
NCBI nr blastx | gi|383865409 | 2e-28 | 43.43% | PREDICTED: low density lipoprotein receptor adapter protein 1-like [Megachile rotundata] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005515 | 7.7e-24 | protein binding | |
KEGG pathway | aga:AgaP_AGAP008521 | 3e-26 |   | |
  | K12474 (LDLRAP1, ARH) | maps-> | Endocytosis | |
InterPro domain | [30-166] IPR011993 | 7.7e-24 | Pleckstrin homology-type | |
[37-162] IPR006020 | 8.4e-14 | Phosphotyrosine interaction domain | ||
Orthology group | MCL16486 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204701-TA
ATGTTGAAGAACAATTCGAAACACAAAAAACTTTGTGAGGAGTTGGCGCTAGCTGAGTGTGAGGGGGAGGGCTGGTGGAAAGAGGCGCGGGAAGGGAAAGGAAACACAGAGGTCCGGTACGCAGGGGTCGCACCCGTGGAGCGAGCCGCCTCCGCCCCCGCTACCGCTCTTGCTGTGCGCTCGGCCTTACACACGGCGAAAACTATGAACAAAAAGTTGCCGAGAGTGAATTTGGATATCAGTCCTAAGGGTATCCTTGTGTCTGACGCTGAATCACAAGAAGACGTTCTCAGCCTGTCCATTTACAGAATCTCATACTGCTCAGCGGACGCGGCGAACGCTCGTGTGTTCGCAGTGGTAGAAGGCGCGGAAGCCGGAGCGGGCGACGAGCACGCGGTTCACGTGTTCGTGTGCGCTAGACGCAAGCAAGCGCGCACCTTGGCTCTATCGCTGGCACATGCGTTTAATGATGCCTACCAGGCGTGGCAAGCTAACGAAGCGGCATCCTTGAAATCGGGAGGCAAAAGACTAATAACTCCCTGGGTAAATTTCCCCGATGAGTCCGACGAGGATGTTGTAGATCAGTGGGACGCGCCCGCTCCGCTTGTCACTTTCGCTTAA
>DPOGS204701-PA
MLKNNSKHKKLCEELALAECEGEGWWKEAREGKGNTEVRYAGVAPVERAASAPATALAVRSALHTAKTMNKKLPRVNLDISPKGILVSDAESQEDVLSLSIYRISYCSADAANARVFAVVEGAEAGAGDEHAVHVFVCARRKQARTLALSLAHAFNDAYQAWQANEAASLKSGGKRLITPWVNFPDESDEDVVDQWDAPAPLVTFA-