| DPOGS204759 | ||
|---|---|---|
| Transcript | DPOGS204759-TA | 339 bp |
| Protein | DPOGS204759-PA | 112 aa |
| Genomic position | DPSCF300231 + 1421-1833 | |
| RNAseq coverage | 1582x (Rank: top 8%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006443 | 2e-39 | 62.50% | |
| Bombyx | % | |||
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_UPI00022C98DA | 1e-22 | 49.02% | UPI00022C98DA related cluster n=2 Tax=unknown RepID=UPI00022C98DA |
| NCBI RefSeq | XP_970337.1 | 6e-21 | 46.94% | PREDICTED: similar to selenoprotein M [Tribolium castaneum] |
| NCBI nr blastp | gi|340711279 | 4e-22 | 46.90% | PREDICTED: selenoprotein M-like [Bombus terrestris] |
| NCBI nr blastx | gi|350411994 | 6e-22 | 49.02% | PREDICTED: selenoprotein M-like [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [14-111] IPR012336 | 1.1e-26 | Thioredoxin-like fold | |
| [29-103] IPR014912 | 6.5e-26 | Sep15/SelM redox | ||
| Orthology group | MCL18462 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204759-TA
ATGTCTACTTTCACTCAATTTTTATTGATAACTTTTTGTGTTATTGCCGCAATCTCAGCATATGAAGATACGGATATCGTATCGGCACGGATTGAGACATGTCGAGGTTGTTCTTTAAACCGGCTTCCGGAAGTGAAGAGATTCGTAATGGACGACGCCCCACATTTTGAGCGTCTAGAAGTTAAGTTTATCACTGGGGCTCCTCCTGAATTAATTCTCCTCGGAAATGGTGATAAGGAGTTGGAGAGGATACCACTGTCAAACTTAAGTCGTCAAGAATGTAATGATCTTGTAAAGAGCAAGGGATTCATCAAGAGGAATGACAAAGAGGAGTTCTAG
>DPOGS204759-PA
MSTFTQFLLITFCVIAAISAYEDTDIVSARIETCRGCSLNRLPEVKRFVMDDAPHFERLEVKFITGAPPELILLGNGDKELERIPLSNLSRQECNDLVKSKGFIKRNDKEEF-