| DPOGS205104 | ||
|---|---|---|
| Transcript | DPOGS205104-TA | 237 bp |
| Protein | DPOGS205104-PA | 78 aa |
| Genomic position | DPSCF300172 - 330520-337147 | |
| RNAseq coverage | 437x (Rank: top 28%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005297 | 3e-20 | 62.69% | |
| Bombyx | BGIBMGA005094-TA | 1e-20 | 64.18% | |
| Drosophila | Atet-PA | 2e-20 | 60.56% | |
| EBI UniRef50 | UniRef50_E0VFB5 | 1e-21 | 65.75% | ABC transporter, putative n=5 Tax=Neoptera RepID=E0VFB5_PEDHC |
| NCBI RefSeq | XP_002424809.1 | 2e-22 | 65.75% | ABC transporter, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242008016 | 5e-21 | 65.75% | ABC transporter, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242008016 | 2e-20 | 65.75% | ABC transporter, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005524 | 4.2e-28 | ATP binding | |
| GO:0016021 | 4.2e-28 | integral to membrane | ||
| GO:0005525 | 5.7e-06 | GTP binding | ||
| GO:0003924 | 5.7e-06 | GTPase activity | ||
| KEGG pathway | tgu:100222171 | 7e-17 | ||
| K05679 (ABCG1) | maps-> | ABC transporters | ||
| InterPro domain | [15-78] IPR020064 | 4.2e-28 | ABC transporter, G1-like | |
| [45-76] IPR004881 | 5.7e-06 | Ribosome biogenesis GTPase RsgA, putative | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205104-TA
ATGGAAGTCGCTTACAGCAGTGCCCTAGGTCAACCTCATCTGTCACATCTGCCACAAAGGCCACCCATACATCTCGGATTCCAGGACCTATCCTACAGTGTGCCCGATGGAAAATCATCAAAATTGATATTAAGAGGACTCAATGGGGAATTTCGTTCGGGACAGTTGACAGCTATACTCGGACCCTCGGGTGCTGGGAAGAGCACTCTCCTTAACATACTAGCTGGATACAGGTGA
>DPOGS205104-PA
MEVAYSSALGQPHLSHLPQRPPIHLGFQDLSYSVPDGKSSKLILRGLNGEFRSGQLTAILGPSGAGKSTLLNILAGYR-