| DPOGS205227 | ||
|---|---|---|
| Transcript | DPOGS205227-TA | 249 bp |
| Protein | DPOGS205227-PA | 82 aa |
| Genomic position | DPSCF300265 + 119165-119749 | |
| RNAseq coverage | 3680x (Rank: top 3%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006469 | 8e-43 | 93.90% | |
| Bombyx | BGIBMGA003828-TA | 1e-39 | 84.15% | |
| Drosophila | Taf10-PA | 2e-24 | 52.94% | |
| EBI UniRef50 | UniRef50_G6CVZ1 | 4e-42 | 100.00% | Transcription initiation factor TFIID subunit 10 n=3 Tax=Arthropoda RepID=G6CVZ1_DANPL |
| NCBI RefSeq | XP_002409390.1 | 2e-25 | 61.73% | transcription initiation factor TFII-D, subunit TAF10, putative [Ixodes scapularis] |
| NCBI nr blastp | gi|332376739 | 6e-26 | 66.67% | unknown [Dendroctonus ponderosae] |
| NCBI nr blastx | gi|332376739 | 1e-24 | 66.67% | unknown [Dendroctonus ponderosae] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 1.3e-45 | nucleus | |
| GO:0006352 | 1.3e-45 | transcription initiation, DNA-dependent | ||
| KEGG pathway | dre:556710 | 8e-26 | ||
| K03134 (TFIID8, TAF10) | maps-> | Basal transcription factors | ||
| InterPro domain | [1-82] IPR003923 | 1.3e-45 | Transcription initiation factor TFIID, 23-30kDa subunit | |
| Orthology group | MCL11054 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205227-TA
ATGTCTGGCTTCGAATCTCAAGATCCTAGGTTAATCCGTCTGATAGCGTTGGCGTCACAGAAATTCCTATCAGATGTAGCGAACGATGCGCTCCAGCACTGCAAGATGAGAACGTCCAGTCAGATGACACAGAGTACTAAAAACCAGAAAGGTCCAAAGGAAAAGAAATACATCATGACAATGGAGGACTTAGTGCCGGCATTACAAGAGTACGGCATCTCGGCCAAGAAACCGCACTACTTCGTCTGA
>DPOGS205227-PA
MSGFESQDPRLIRLIALASQKFLSDVANDALQHCKMRTSSQMTQSTKNQKGPKEKKYIMTMEDLVPALQEYGISAKKPHYFV-