DPOGS205530 | ||
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Transcript | DPOGS205530-TA | 921 bp |
Protein | DPOGS205530-PA | 306 aa |
Genomic position | DPSCF300056 + 263412-269473 | |
RNAseq coverage | 1216x (Rank: top 10%) |
Annotation | ||||
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Heliconius | HMEL011294 | 3e-130 | 68.60% |   |
Bombyx | BGIBMGA000082-TA | 1e-89 | 79.10% |   |
Drosophila | Arp14D-PB | 5e-85 | 87.35% |   |
EBI UniRef50 | UniRef50_G3QZJ7 | 5e-131 | 67.05% | Uncharacterized protein n=13 Tax=Eukaryota RepID=G3QZJ7_GORGO |
NCBI RefSeq | XP_309181.4 | 3e-85 | 76.62% | AGAP000985-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|354504611 | 4e-112 | 60.12% | PREDICTED: actin-related protein 2-like [Cricetulus griseus] |
NCBI nr blastx | gi|354504611 | 1e-109 | 60.12% | PREDICTED: actin-related protein 2-like [Cricetulus griseus] |
Group | ||||
---|---|---|---|---|
KEGG pathway | ptr:744996 | 6e-43 |   | |
  | K05692 (ACTB_G1) | maps-> | Pathogenic Escherichia coli infection | |
  |   |   | Regulation of actin cytoskeleton | |
  |   |   | Viral myocarditis | |
  |   |   | Bacterial invasion of epithelial cells | |
  |   |   | Tight junction | |
  |   |   | Adherens junction | |
  |   |   | Arrhythmogenic right ventricular cardiomyopathy (ARVC) | |
  |   |   | Phototransduction - fly | |
  |   |   | Vibrio cholerae infection | |
  |   |   | Dilated cardiomyopathy | |
  |   |   | Shigellosis | |
  |   |   | Leukocyte transendothelial migration | |
  |   |   | Hypertrophic cardiomyopathy (HCM) | |
  |   |   | Phagosome | |
  |   |   | Focal adhesion | |
InterPro domain | [1-303] IPR004000 | 2.3e-177 | Actin-like | |
Orthology group | MCL11972 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205530-TA
ATGGATGATCAGGGAAGAAAAGTTATCGTTTGTGACAATGGCACAGGTTTCGTAAAATGCGGATACGCCGGCAGTAACTTCCCTGCGTTCATTTTTCCGTCAATGGTCGGCCGGCCGATTATTAGAGCGGAAAATAAAATCGGAGACATTGATGTTAAGGATTTGATGGTCGGAGATGAAGCGTCTCAACTCCGTTCCATGCTCGAAGTCAGTTATCCCATGGAAAATGGCGTGGTTAGAAACTGGGAGGATATGTGTCACGTCTGGGATTACACATTTGGTCCCAGCAAGATGAATATTGACCCCAAGGACACCAAAATACTGCTCACCGAGCCACCGATGAACCCCACTAAAAATAGAGAGAAAATGATTGAGGTTATGTTTGAGAAGTACGGTTTCGACAGCGCCTACATAGCCATACAAGCGGTGCTCACGCTGTACGCCCAGGGACTGATATCGGGAGTGGTGGTGGACTCAGACGGGAGGGTCATCAAAGTGGGGGGAGAACGGTTTGAAGCACCCGAGGCCCTGTTCCAGCCGCACCTCATCAATGTCGAGGGTCAAGGGATCGCTGAACTTGTCTTCAACACTATACAGGCGGCGGACATAGACATGAGGAACGAGTTGTACAAACACATCGTGCTGTCCGGGGGCTCCACCATGTACCCGGGGCTGCCCTCGCGGCTCGAGAGGGAGATCAAGCAACTGTACCTGGAGCGAGTGCTGAGGAACGACTCGGAGAAGCTGGCGAAATTCAAGATCCGTATTGAGGATCCGCCGCGCCGTAAGGACATGGTGTTCATCGGCGGCGCCGTGCTGGCCGAGGTGTGCAAGAACAGGGACAACTTCTGGCTCACCAGGAGCGACTACATGGAACAGGGCATTTCCTGTCTCCGCAAGCTCGGACCTCGGGCCACTTAA
>DPOGS205530-PA
MDDQGRKVIVCDNGTGFVKCGYAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASQLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNIDPKDTKILLTEPPMNPTKNREKMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVVDSDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLRNDSEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVCKNRDNFWLTRSDYMEQGISCLRKLGPRAT-