Monarch geneset OGS2.0

DPOGS205610
TranscriptDPOGS205610-TA2556 bp
ProteinDPOGS205610-PA851 aa
Genomic positionDPSCF300167 + 240864-246480
RNAseq coverage31x (Rank: top 75%)
Annotation
HeliconiusHMEL0095651e-8148.33% 
BombyxBGIBMGA007145-TA4e-12550.67% 
DrosophilaNle-PA6e-1526.22% 
EBI UniRef50UniRef50_E2A2S23e-6826.75%WD repeat, SAM and U-box domain-containing protein 1 n=9 Tax=Endopterygota RepID=E2A2S2_CAMFO
NCBI RefSeqXP_974682.11e-7226.51%PREDICTED: similar to AGAP005577-PA [Tribolium castaneum]
NCBI nr blastpgi|910870552e-7126.51%PREDICTED: similar to AGAP005577-PA [Tribolium castaneum]
NCBI nr blastxgi|910870553e-7226.07%PREDICTED: similar to AGAP005577-PA [Tribolium castaneum]
Group
Gene OntologyGO:00055151.8e-47protein binding
GO:00001511.3e-09ubiquitin ligase complex
GO:00165671.3e-09protein ubiquitination
GO:00048421.3e-09ubiquitin-protein ligase activity
KEGG pathwayisc:IscW_ISCW0173252e-15 
 K10260 (FBXW7, SEL10)maps-> Ubiquitin mediated proteolysis
InterPro domain[2-311] IPR0110461.8e-47WD40 repeat-like-containing domain
[367-679] IPR0159436.6e-31WD40/YVTN repeat-like-containing domain
[777-847] IPR0036131.3e-09U box domain
[776-847] IPR0130833.9e-09Zinc finger, RING/FYVE/PHD-type
[274-311] IPR0197812.7e-08WD40 repeat, subgroup
[272-311] IPR0016806.9e-08WD40 repeat
[256-270] IPR0204727.5e-06G-protein beta WD-40 repeat
Orthology groupMCL16783 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205610-TA
ATGATTGACCCAGTGTTGGTGACGTCACTTCAAGTAGGTCGCCGCGAGGTGACCTGTTTGGACACTATTTGTGGACGTCTGGTTGCGGGCATAGGAGACGGAACGCTAAAACTCTGGCGATGGAACCGATCCTCAGGCTGGTTACTGCTCGCTGAACAAAAGCGTGCACATCGATATGGTGTCACAGGAACACGCTTTGCCACTTCCGGAGTTCTACTTGCAACAGTTGGAATTGATGGTGCTGCAAGAATATGGTCTGCATATGAAGGTCTGCTTGAGAAACGTACCTTGGCTGGTCCGGATACGGCAGCAGCGAGATCTTTGCAGTGGGCGTCGAGCGAACGATTGGCTGTTGGACACGATGACGGAGGGGTTCGGGTATGGGATGTCCGCGGTGGAGCGTTGCTAGCATACATACGACCTCATGAAGGGGCAGTTTACGCGCTAGCAACATTGGCTTATAATGCTCTCTTACTTACTTCTTGTACTGATGGTGTTTTAAAAGTTTTTGATTTTCAAGAAGTAACTGCGCATGGAAACGACGGCACTGCAGGACCGGCACCACTTTTTTGGGAAGATGGAGCTCATGATCTGGGAGCACAATGTAGTACGGAATGTGGTAGCGATGCAGCTACTGGCGGACACGACGGACGCGTGCGTATTTGGCGGGTTTTGGGTGTAGGACGACAGAGACGAGTCGAAGCAGATGTAACTTTGACTGGTCACACAGCTGCTGTCACATCCTTGAGATGGAAACGTGACCTTCTGACATCTGCGTCACTAGATCGCACTGCGAGGTTATGGTCTGTCAGCTCAACCGTTTGTCTCCGAGTTTTACATGCACATTCACGTTACCTTACATGTATTGCTTTATCAATGGATCTGAGATATATAATAACGGGTTCAAACGATAAAACAATACGGACATGGTCTTTGGGCGTCTTCTCTATAGATGATGACATTCAACCGGAATGTAATCATATTGTACATTTTGGACTTGGTGACCTGGAGGGAATCGGTCCAGTAGATGAGGATATTGAAGATGCTAATGACACAGTGGTATGTACTAGTATAGGAACACATCGCATCGACCGCGTGCATCATGCCGCAGCCATTAACTGCATTGCTGCTTCCCAGTCATTAATCGCAACTGCCTCCAGTGATGGATCCGTAAAAATATTCAGATGGTTTTGGAAAGACGAAGGTTTTAAACTTAATCTAGAGTTGGAACTATCTGCTCACACTTATCCAGCTTTAGCCGTCGATTTTGGAGCAAATGATGCACTTTTACTAAGTGCTGGGCTTGATGGCTGTGCGCGGCTTTGGGATATTATGGAACGGAAGAAAGGAATAGAAAAGAAGTTTAAAGGGTTGTTGTTTTATTACAGAGTATATCCAGGTCTTGTAGAAGCAGCGTTATGTTGTGCATGGTCTGCAGACGGTGCACTCGCGGTTGCAGGAGGAGCCGCTGGTGAATTACAGCTGCTCGCTCCTCCGCGTCCAGACTGTTTGTATCAACAGAGTGATGCACATGATCTTGGAGTTCTTAGTTGTGATTTTGCACCCATTTCCCACAATCATGCGTCCGAAAGTGAAAATAAAACGTACCTTCTCGCAACGGGAGGCCGAGATGCTCTAATAAAATTGTGGCAAATAACTTCGGAAGTTGAAAACGAGCACATTGAATGTGTATCATTGAAGCTCGCAAGAGCTCTAGCAGCGTATGGCAGTGCAGTGCAATGTGTCCGTTGGGGTCAGTTTGGTCGATATGAGAATGAGTTGGCACTAGCCACAGGTGGTGCAGATCGCTGGGTTCGCGTGTGGCGTGTAACTGAAACTAAATCGGGTCTGGAAGCTATAGCGACAGTGTCAGTGCCTGCTGGAGCTGCAGGAGGCGCGCCAGCTGTGCGTCTTTTAGCCTACGAACGTACGTCTCTGCTAGCCGTTGGATCATTATCCGGTACACTTGCTTTGTGGCAACTTCCAAATACCGATCTCATGGAAGAATGTGAGGGAGCAGAACCACGATTTTGGAGCATAAATGGTGTCTTGAGATGGTTATATGAATATATTACAAGGTCAAACGAGGATACAGATAATGTAGAAGTCATAGAAAAGCGTCTGACTGAAGCAGCACGAACCTCACAAATGACAGGCGCTCGACTACTGGATGACCCTCTTGAAGAGTTAATGAAGGCTTTTGGTTACGAAGATGAAAATGACGAAGAAAACACCGCAAACGATGAAAACACCGTCATACGTGACAGGCTAATTGATGAAATACTTTGGTTACGCAGGGAGCCCATGAACCTCGAGCTGGAGTCATCGATCCCGCACGCACTACGATGTCCGATATCGCACGAAGTGATGACAGAGCCAGCGCGAGCTGCTGATGGTTTCACCTACGAACGACAGACCTTCCTTGACTGGTGCCTGGCTACCGGACCAGAGGCGGTACGGTCACCGGTAACCGGTCGTCGCCTACGTAGTTCGGTTGTGGCCCCAAACAGAAAGTTGCGAGAGCGACTTCGAGAACACTGCGCTTGGAAACGGTAG

Protein sequence:

>DPOGS205610-PA
MIDPVLVTSLQVGRREVTCLDTICGRLVAGIGDGTLKLWRWNRSSGWLLLAEQKRAHRYGVTGTRFATSGVLLATVGIDGAARIWSAYEGLLEKRTLAGPDTAAARSLQWASSERLAVGHDDGGVRVWDVRGGALLAYIRPHEGAVYALATLAYNALLLTSCTDGVLKVFDFQEVTAHGNDGTAGPAPLFWEDGAHDLGAQCSTECGSDAATGGHDGRVRIWRVLGVGRQRRVEADVTLTGHTAAVTSLRWKRDLLTSASLDRTARLWSVSSTVCLRVLHAHSRYLTCIALSMDLRYIITGSNDKTIRTWSLGVFSIDDDIQPECNHIVHFGLGDLEGIGPVDEDIEDANDTVVCTSIGTHRIDRVHHAAAINCIAASQSLIATASSDGSVKIFRWFWKDEGFKLNLELELSAHTYPALAVDFGANDALLLSAGLDGCARLWDIMERKKGIEKKFKGLLFYYRVYPGLVEAALCCAWSADGALAVAGGAAGELQLLAPPRPDCLYQQSDAHDLGVLSCDFAPISHNHASESENKTYLLATGGRDALIKLWQITSEVENEHIECVSLKLARALAAYGSAVQCVRWGQFGRYENELALATGGADRWVRVWRVTETKSGLEAIATVSVPAGAAGGAPAVRLLAYERTSLLAVGSLSGTLALWQLPNTDLMEECEGAEPRFWSINGVLRWLYEYITRSNEDTDNVEVIEKRLTEAARTSQMTGARLLDDPLEELMKAFGYEDENDEENTANDENTVIRDRLIDEILWLRREPMNLELESSIPHALRCPISHEVMTEPARAADGFTYERQTFLDWCLATGPEAVRSPVTGRRLRSSVVAPNRKLRERLREHCAWKR-