| DPOGS205652 | ||
|---|---|---|
| Transcript | DPOGS205652-TA | 573 bp |
| Protein | DPOGS205652-PA | 190 aa |
| Genomic position | DPSCF300023 + 242483-243055 | |
| RNAseq coverage | 2x (Rank: top 91%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006591 | 7e-86 | 86.08% | |
| Bombyx | BGIBMGA001001-TA | 1e-85 | 83.94% | |
| Drosophila | l(1)sc-PA | 2e-24 | 45.36% | |
| EBI UniRef50 | UniRef50_Q2I1Z2 | 2e-83 | 83.94% | Achaete-scute-like protein n=2 Tax=Obtectomera RepID=Q2I1Z2_BOMMO |
| NCBI RefSeq | NP_001037416.1 | 3e-84 | 83.94% | achaete-scute-like protein [Bombyx mori] |
| NCBI nr blastp | gi|112984016 | 5e-83 | 83.94% | achaete-scute-like protein [Bombyx mori] |
| NCBI nr blastx | gi|112984016 | 4e-87 | 83.94% | achaete-scute-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 2.1e-38 | DNA binding | |
| GO:0005634 | 4.7e-24 | nucleus | ||
| GO:0006355 | 4.7e-24 | regulation of transcription, DNA-dependent | ||
| KEGG pathway | ||||
| InterPro domain | [46-183] IPR015660 | 2.1e-38 | Achaete-scute transcription factor-related | |
| [45-118] IPR011598 | 4.7e-24 | Helix-loop-helix DNA-binding | ||
| [57-118] IPR001092 | 5.3e-20 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | MCL15433 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205652-TA
ATGCCCATGGCGGCGGTACACGCTTACCAAAATCTCGGTGTAAACCAAAAATTGACTCAGCTGCAAAATGCTAGACGTCTCGCACCTGCACCCGTAGATGCTCGCTGCAAAAAGAGATCTTATCTCCATCAAACCTATCCCACTCAACCTGCTTCTGTAGCAAGAAGAAACGCAAGAGAAAGGAATAGAGTGAAACAAGTTAATAATGGATTTGCTGCTCTACGACAACATATTCCATCAGCTGTAACTGCGGCTTTGGCAGGCGGAAGAGGTTCTTCACGAAAATTAAGCAAAGTGGATACTTTGAGACTAGCGGTTGAATACATAAGAAGCCTTAAACGATTATTAGAAGAAAGTGAAGAAGGCTGTAATGAAGCACAAATGAGTTTGGGCTTAAGTTCAAATGGACCTCAAACACCCCCTTTCTCAGAAGAATCCCATTCACCTGCACCCTCACTCCATTCAGAGGGTTCAACAGGTCCAAATTGTCAAGATGCTTATGATTCCTATGAACCTATGAGTCCTGAAGATGAAGAATTATTAGATGTTATATCATGGTGGCAACAGCAATGA
>DPOGS205652-PA
MPMAAVHAYQNLGVNQKLTQLQNARRLAPAPVDARCKKRSYLHQTYPTQPASVARRNARERNRVKQVNNGFAALRQHIPSAVTAALAGGRGSSRKLSKVDTLRLAVEYIRSLKRLLEESEEGCNEAQMSLGLSSNGPQTPPFSEESHSPAPSLHSEGSTGPNCQDAYDSYEPMSPEDEELLDVISWWQQQ-