Monarch geneset OGS2.0

DPOGS205910
TranscriptDPOGS205910-TA6660 bp
ProteinDPOGS205910-PA2219 aa
Genomic positionDPSCF300089 + 119779-138892
RNAseq coverage35x (Rank: top 74%)
Annotation
HeliconiusHMEL0142180.075.39% 
BombyxBGIBMGA007009-TA0.080.28% 
DrosophilaCa-alpha1T-PC0.083.41% 
EBI UniRef50UniRef50_E2B5880.058.03%Voltage-dependent T-type calcium channel subunit alpha-1H n=12 Tax=cellular organisms RepID=E2B588_HARSA
NCBI RefSeqXP_001604402.10.060.05%PREDICTED: similar to voltage- gated calcium channel alpha subunit cav3.3 (voltage-dependent t-type calcium channel [Nasonia vitripennis]
NCBI nr blastpgi|3072138800.058.03%Voltage-dependent T-type calcium channel subunit alpha-1H [Harpegnathos saltator]
NCBI nr blastxgi|3479679810.058.12%AGAP002505-PA [Anopheles gambiae str. PEST]
Group
Gene OntologyGO:00160201.7e-56membrane
GO:00550851.7e-56transmembrane transport
GO:00052161.7e-56ion channel activity
GO:00068111.7e-56ion transport
GO:00519251.8e-10regulation of calcium ion transport via voltage-gated calcium channel activity
GO:00052451.8e-10voltage-gated calcium channel activity
GO:00160211.8e-10integral to membrane
GO:00068161.8e-10calcium ion transport
KEGG pathwaynvi:1001208010.0 
 K05315 (CACNA1N)maps-> MAPK signaling pathway
InterPro domain[33-303] IPR0058211.7e-56Ion transport
[16-32] IPR0054451.8e-10Voltage-dependent calcium channel, T-type, alpha-1 subunit
Orthology groupMCL10580 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205910-TA
ATGTTGATAATATTACTAAACTGCGTGACGCTGGGCATGTACCAGCCCTGTGTGGACGACCAGTGCGTCACCAACAGGTGCAAGATATTACAGGTTTTCGATGACATCATATTCGCATTCTTTACACTTGAATTGACGATTAAAATGGTGGCGATGGGAATCTACGGTCATGGGACCTACCTGGCAGATTCTTGGAACCGACTGGATTTCTTTATAGTCATGGCTGGGGCTCTAGAATATGCTTTGAACGTTGAAAATATAAATTTATCTGCTATTAGAACCATCCGAGTTCTAAGGCCCCTGAGAGCTATTAACAGGATACCGAGTATGCGTATTCTAGTGATGTTACTTCTCGACACATTACCGATGTTAGGAAATGTTCTTCTTCTGTGCTTCTTTGTTTTCTTCATATTCGGTATAGTTGGAGTACAGCTCTGGGAAGGAATTCTGAGGCAGCGCTGCGAACTTGTCCTGCCACCTAACGTACTACGACCCAACATATCGTTTCACTACGAGTTCTCGAAAGAGTTGGACTACATCTGTACGACGCCGGAAGATAGCGGTATGCATTTATGTGGAAACTTCCCTCCTTACCGATATGGACCGTTAGTCTGCAACGACACAGCGAAACCATTCTCATACAACTACCCGACAAACAACTCATGTGTTGACTGGAATCAGTATTATACCAACTGCACCCAACGTGGTCCCAATCCATTCCAAGGAACAATATCTTTCGATAACATAGGGCTTGCATGGGTAGCTATATTTTTGGTTATATCTTTGGAAGGATGGACGGATATCATGTATTATGTACAAGATGCACATAGTTTCTGGGATTGGATATATTTCGTTCTATTAATTGTAATCGGTTCATTTTTCATGATCAATTTGTGCCTGGTCGTAATAGCGACTCAATTCAGCGAAACAAAGAAACGAGAAATGGAGAGAATGCGAGCTGAACGGGCTCGTTTTACGTCGTCTTCGACTTTAGCCTCGTCTACAAACAATAGCGAACCAGCCACTTGTTATGCTGAAATAGTCAAGTATGTCGCGCATTTGTGGAGACGATTCAAACGACGAATGGCTAAAAAGATCAGAGTATATAAATATCAACGAGCTCAACTAAAATGGAGGACCAGCCAAGAAACTCTTCAATTGCCTGCTAATCGTCCAAAACAACACCATCCATGTTGTCCCCGTGTTCACGTTCAGGGTAACGGAAAAGGAATCACTGAAGAGGTTGGTGATGAACCTCTCAGCAGACCGAGTTTATTACGTGTACCTTCACTCTCAGCTGCCGATCTTGAGAACGCATCAAACCTGTCGTTGCTGTCGCCTCCATCACTAGCTCGAAGACGTTCCTCCGTCATGTTCAGTGATACAGTGCTGCTTCATGTTCCGAACGCCCAACACCTAGCTCATCCCCACAACGTATGCTCTTCGGAAAAGATGACCCAAACAGATTCATTGTGTCAACGTGACTGGCTTAAGTGCCAAAGTGGTGAGTCTAGGATGGTAGATCTAGACACGCTGTTAGAGCGGCATGCGCTATTAAATCTACTCTCACTTTTCTTCCACTTCTTAGAATTGTTAGAATTTGACTTGCCACCCGGAGAAACTGCTGAAGATCGAGCCGCAGCGGGAGGAACAATGTCATGTCAAGAATTGTTAGCATTATCAGGTGCACTATCAGCTGCTTTACCAACAGGCCAAGTTGCATTGGACACATTTTTTGAAGAACTGACGAAAGGAATGAGCAAACGAGCCGGTGAAGATAAAATGGAAACTAAGATCGTAGAAATAGAAGATTTTTCATGCTGCGCAGAACTAATAGCCGCCGAGGCCGCTGCCACAGAAAAGAAAAAAGGCCGAATTGCAAACGCCTGCATTAAATTGTGGCGAAGAATATTGAAATTCTTTTCATTGTTACGAAAACATATTAAAACCATTGTTAACCATAAATATTTCCAACAAGGTATTTTGCTGGCTATATTAATTAACACGCTGTCTATGGGAATAGAGTACCACAACCAACCTCAAGAGTTGACAGTAATTGTGGAAATCAGTAACGTTGTTTTTTCTGGAATCTTTGCTGTCGAAATGCTACTTAAAATTATTTCGGAAGGGCCCTTTAATGCATTTGAGTTAGCTCAGAGTATGGGGAACGAACATGATTTGGCTGGAAGTTCAGGCTTATCTGTCTTACGTACATTTCGACTTCTACGCATACTGAAGCTGGTACGATTCATGCCCAACTTAAGAAGACAGCTGTTCGTTATGCTGAGGACCATGGACAATGTTGCCGTGTTTTTTTCGCTGCTGGTTCTTTTTATTTTTATATTCAGCATCCTCGGTATGAACCTCTTCGGGTGCAAATTCTGCAAGAAAGATGAAGAGGGCGATGTAGAGTGCGACAGAAAAAACTTTGATACTCTCTTGTGGGCCTTTGTGACGGTGTTTCAGGTTTTAACTCAGGAGGATTGGAATGTTGTTTTATTTAACGGTATGGAAAAAACGAGTCATTGGGCTGCATTGTATTTTGTGGCCTTAATGACTTTTGGAAACTATGTTTTGTTTAACTTACTAGTAGCCATTTTAGTAGAAGGATTTAGTTCAGAGAGAAATGAAAGAAGAGAACGAGAACAACGTGAATTGGCTAAATCTAAATTATCAAGTGAATGTTTTTCTGACAATAATGAATTACAGTACGACGAATCTAATTCAGGATCGCATTCTAGTGACAGTTTTTCACAGAATGAAATAAAAAACTACTGGAAATCAGCAGATGATGTCCGCAAAGTCAAAGATGATAACGGACATAAAGATAAATCCGTAAAAGTTCGCCGCAAAGCTAAATCCTCCGCACACCATCCGTCGTTATGCAAAGACTGTGCGCAATCAAACAAATGTAACATTCAAAAAGAATCAAAAATGTTGGCATCAAATATAGGCACTATTGAAAATGGTAATGGAACTATTGTCCCAAAAATAACTCATACAGCGGCTACACCTCAAGATTCACCATCCACGACCTTGGAGCCTGGTGCAACGTTCAGAGATTTTAACGTAGCCTTAACATTAGAAAGATCGACCATGCTATCTAGTTTAGACTCTATAGATAGAACATCGTGTACGAGTATACCAGGATTACTGAAACCTCCAAACAGTTATACGCTTACACTTCATTCTGCAGCTGCTCAATTAGGCGCTGAGAAAGCTAGGCTCCCACCACCAATGACTCTTGCTCCACCACCCATCACTCTCGCACCTCCACCATCCAGATCTACCTCACCTGGATCTATAACACCCACTATTCCCAGATCATTACCATCCCCTATAATACCAGAAAAAAATTTTCAAGTTACTATAGCCAAGGACGAAAACTGTCTCAATGTTAGTGATAAATCTAGTTTATTGAGTTCACAAAAAAGTCTCAGCATAACAACACCAAATATAGTCGGAGATGATAAATATAGAGTGCAAAGAGGCTACAGTTGGCGGCTGTCTCGACCAAGCTTAAGGCGCAAAAAGCAACGAACAGGCTCTGACTCTGACGCTGTAGTCCTTAATAATGGACGTGATCATATTGCATGTAACGGATCTAATCTTAGAAAAAATGAGTTGTTGCTGTCTTCAACTATAGTTATTAAAAATGACACACAATCAGAGATCAACAATAGACCAAAAACCCAGTTACCTGCTCCTAGAGTGCTAGCTACGCAAGCTAGACGAGTTTCTGCACATACAACTCCAATTTTACCAGATGTATCTTGGAAAGCGCCAGAAGTAGGAGCAGGATTTTCGTCTGACTCGACAGTAAGATTAGATGCTGTAAAATCTCCACATCATAGACTTTCTTTGACAAATGACTACCTTACGGTAACGTCAGGTTCGGAAATCAAAGCAAGCAATTTGGCACCAGCAGTTGCTCCAAATGCACAAATACAGTCCAGAAATGAACCTGTACGAACGAGCAGTCAAGCCTTACCTCTCATTAAACAAATTAACGAGGAGGTGGCGATTAACAATAGTGTCTGCATATTTTCGTCTAGATTTGATAGGCGACGATTTCATTTTAAAGATCTTTTTCGATTTATGGAACCAACGGGATGTCTCAAGGAAAAAGAGGATTACTCTTTATACATATTCGCCCCCGATAACAAAATTAGAACACTTTGCACGTGGATGGTAACAAGAAGTGCGTTTGATAATATAGTTTTACTATTCATAGCGCTAAATTGTATCACCTTAGCTATGGAGCGACCCAACATTCCCCCGGACTCTAAAGAAAGGGCTTTTTTGTCTAGCGCTAATTACGTCTTTACAGTCGTGTTCGCTGTTGAAATGTTTATTAAGGTTGTCGCATCTGGAATGTTTTACGGGTCTGAAGCTTATTTTACTTCTGGTTGGAATATCATGGATGGTTCTCTGGTTATTATTTCTATAATTGATTTGTTAATGTCATTAGTGTCCGAGTCTAGTCCACGAATTTTTGGAATTCTAAGGGTATTTAGATTGTTGAGATCTTTAAGACCCTTGAGAGTAATTAATAGGGCCCCAGGATTAAAGCTCGTCGTTCAAACATTGTTATCATCACTTAGACCGATTGGAAATATAGTTTTAATATGCTGCACGTTTTTCATTATATTTGGCATTTTAGGAGTTCAGCTCTTTAAAGGTGCATTTTTCTATTGTGAAGGAGCAAGTATTAAAAACGTCAAAAATAAATCAGATTGTCTTGCTATTGAGGGTAATGTATGGGTAAATAGGAAATACAACTTCGATGACCTGGGTAAAGCTTTGATGTCATTATTTGTGCTTAGTTCAAGGGATGGTTGGGTAAATATCATGTACACAGGCCTTGACGCTGTAGGTGTTGATCAGCAGCCCATTGTTAACTACTCAGAATGGAGACTTTTATACTTTATTGCATTTATATTATTAGTTGGATTCTTCGTTCTAAATATGTTCGTGGGAGTTGTGGTAGAAAATTTTCACCGATGTAGAGAAGAACAAGAGAAAGAAGAGAGAGTCAGGCGGGCCGCAAAAAGGGCGCTTCAAATGGAAAAAAAGAGACGAAAAATGCATCAACGTCCATATTATGCAGACTACTCACAATACCGCCTTTTCGTACATAATGTAGTCACATCAAAATATTTTGATCTGGCAATTGCGGGTGTCATCGGTTTAAATGTTGTGACTATGGCTATTGAATACTATAGAATGCCACCAGCCCTACAATATGCACTTAAAATATTTAACTACTTTTTCACTGCCGTATTTATACTTGAAGCAGTTATGAAACTTGTGGCACTGGGCTTCAAAATTTATCTAAAAGACAAATGGAATCAATTAGATGTTATAATTGTAATACTATCCATAGTAGGAATAGTTCTAGAAGAATTAGAGACTAACATTATTCCAATAAATCCGACAATAATGAGAGTAATGAGGGTGTTAAGAATTGCAAGAGTATTAAAATTATTAAAAATGGCAAAAGGTATAAGGGCATTATTAGATACGGTAATGCAAGCTTTACCTCAAGTTGGAAACTTAGGACTTCTATTTTTTCTTCTGTTCTTTATATTTGCGGCATTAGGTGTTGAATTATTTGGTAGACTTGAATGTAGCGATGAAATTCCTTGCCAAGGTCTCGGTGAACATGCTCATTTTGCGAACTTTGGCATGGCATTCCTTACACTATTCCGTGTTGCAACTGGAGATAATTGGAATGGCATCATGAAGGATACTTTACGAGAAGATTGTGATAGTTCCGTAGATTGTGTACGGAACTGTTGTGTTTCAACGATTATTGCACCTATATTTTTTGTTGTATTCGTACTTATGGCACAATTTGTACTCGTCAATGTAGTTGTTGCTGTACTCATGAAACACCTCGAGGAATCACATAAACAAATGGAAGATGAAATTGATATGGACGTCGAACTAGAACGTGAATTAGAAAGAGAAGCGGATGATGAGGAAGATAGAGCTCTATGTCGAGCTTTAGAAGAATGTGTTTCTCCTCCGCGACCTTTAAATAAGGTACCATCACTCCCAGCAAATTTCACTTACAGCGAACCCAAACAACAACCGATACCTTCACCTGCACGCAGACGTCGCACTTTACATTCCCATCATGCTTTGTTGCCGGCCGCTTTGCCTCAAAGACGAGCATCTCTGTCACCTCATGCATTTGGACGACGTCGACAGGATTCAACTCCAGAAACACCATATCCACCAGCGCTATACGAAGAAGAGGCACGATTTATAGATGCCGACGACATTGATGAATTAGAACCTGGTAGCCCACCACGACATGATTCCTTTTCCCAAAACCGAAGACAAAGAGTTGATAAAAGAAATTCTCTTCGAGGTGAAGAGGCCAGACTACTTCGACCTGCGCCTATTTTGTTAGCAGTTCCTACAACAAGGCAAAGCCTTCGGCGAAATAGTTCAAAAAGAAGATCTTCTACAGAATCTGGAGCTACAAGCAGATTAAGTCAAATGTCAGTACAAACACCTTCTTCTCCGGAAGAAAATAATAAAGAAATTACTGAAGAAGAAAAAATTAGAATTGTTATAGCTGAACGAAGAAAAATAGATAATATAAAACCCGAACCGGAAGATGTGGAACTATCAGAGCGAGCTTCCTAG

Protein sequence:

>DPOGS205910-PA
MLIILLNCVTLGMYQPCVDDQCVTNRCKILQVFDDIIFAFFTLELTIKMVAMGIYGHGTYLADSWNRLDFFIVMAGALEYALNVENINLSAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWEGILRQRCELVLPPNVLRPNISFHYEFSKELDYICTTPEDSGMHLCGNFPPYRYGPLVCNDTAKPFSYNYPTNNSCVDWNQYYTNCTQRGPNPFQGTISFDNIGLAWVAIFLVISLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRAERARFTSSSTLASSTNNSEPATCYAEIVKYVAHLWRRFKRRMAKKIRVYKYQRAQLKWRTSQETLQLPANRPKQHHPCCPRVHVQGNGKGITEEVGDEPLSRPSLLRVPSLSAADLENASNLSLLSPPSLARRRSSVMFSDTVLLHVPNAQHLAHPHNVCSSEKMTQTDSLCQRDWLKCQSGESRMVDLDTLLERHALLNLLSLFFHFLELLEFDLPPGETAEDRAAAGGTMSCQELLALSGALSAALPTGQVALDTFFEELTKGMSKRAGEDKMETKIVEIEDFSCCAELIAAEAAATEKKKGRIANACIKLWRRILKFFSLLRKHIKTIVNHKYFQQGILLAILINTLSMGIEYHNQPQELTVIVEISNVVFSGIFAVEMLLKIISEGPFNAFELAQSMGNEHDLAGSSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMNLFGCKFCKKDEEGDVECDRKNFDTLLWAFVTVFQVLTQEDWNVVLFNGMEKTSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELAKSKLSSECFSDNNELQYDESNSGSHSSDSFSQNEIKNYWKSADDVRKVKDDNGHKDKSVKVRRKAKSSAHHPSLCKDCAQSNKCNIQKESKMLASNIGTIENGNGTIVPKITHTAATPQDSPSTTLEPGATFRDFNVALTLERSTMLSSLDSIDRTSCTSIPGLLKPPNSYTLTLHSAAAQLGAEKARLPPPMTLAPPPITLAPPPSRSTSPGSITPTIPRSLPSPIIPEKNFQVTIAKDENCLNVSDKSSLLSSQKSLSITTPNIVGDDKYRVQRGYSWRLSRPSLRRKKQRTGSDSDAVVLNNGRDHIACNGSNLRKNELLLSSTIVIKNDTQSEINNRPKTQLPAPRVLATQARRVSAHTTPILPDVSWKAPEVGAGFSSDSTVRLDAVKSPHHRLSLTNDYLTVTSGSEIKASNLAPAVAPNAQIQSRNEPVRTSSQALPLIKQINEEVAINNSVCIFSSRFDRRRFHFKDLFRFMEPTGCLKEKEDYSLYIFAPDNKIRTLCTWMVTRSAFDNIVLLFIALNCITLAMERPNIPPDSKERAFLSSANYVFTVVFAVEMFIKVVASGMFYGSEAYFTSGWNIMDGSLVIISIIDLLMSLVSESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGAFFYCEGASIKNVKNKSDCLAIEGNVWVNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYSEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQEKEERVRRAAKRALQMEKKRRKMHQRPYYADYSQYRLFVHNVVTSKYFDLAIAGVIGLNVVTMAIEYYRMPPALQYALKIFNYFFTAVFILEAVMKLVALGFKIYLKDKWNQLDVIIVILSIVGIVLEELETNIIPINPTIMRVMRVLRIARVLKLLKMAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLREDCDSSVDCVRNCCVSTIIAPIFFVVFVLMAQFVLVNVVVAVLMKHLEESHKQMEDEIDMDVELERELEREADDEEDRALCRALEECVSPPRPLNKVPSLPANFTYSEPKQQPIPSPARRRRTLHSHHALLPAALPQRRASLSPHAFGRRRQDSTPETPYPPALYEEEARFIDADDIDELEPGSPPRHDSFSQNRRQRVDKRNSLRGEEARLLRPAPILLAVPTTRQSLRRNSSKRRSSTESGATSRLSQMSVQTPSSPEENNKEITEEEKIRIVIAERRKIDNIKPEPEDVELSERAS-