Monarch geneset OGS2.0

DPOGS205918
TranscriptDPOGS205918-TA2205 bp
ProteinDPOGS205918-PA734 aa
Genomic positionDPSCF300089 + 389927-396241
RNAseq coverage77x (Rank: top 65%)
Annotation
HeliconiusHMEL0055740.063.46% 
BombyxBGIBMGA007081-TA0.052.38% 
DrosophilaTop3alpha-PA0.057.46% 
EBI UniRef50UniRef50_Q134720.059.16%DNA topoisomerase 3-alpha n=63 Tax=Eumetazoa RepID=TOP3A_HUMAN
NCBI RefSeqXP_001658595.10.053.33%prokaryotic DNA topoisomerase [Aedes aegypti]
NCBI nr blastpgi|1571166520.053.33%prokaryotic DNA topoisomerase [Aedes aegypti]
NCBI nr blastxgi|1571166520.053.19%prokaryotic DNA topoisomerase [Aedes aegypti]
Group
Gene OntologyGO:00036776.4e-303DNA binding
GO:00039176.4e-303DNA topoisomerase type I activity
GO:00056946.4e-303chromosome
GO:00062656.4e-303DNA topological change
GO:00039161.1e-102DNA topoisomerase activity
GO:00082704e-09zinc ion binding
KEGG pathwayaag:AaeL_AAEL0076830.0 
 K03165 (TOP3)maps-> Homologous recombination
InterPro domain[1-604] IPR0003806.4e-303DNA topoisomerase, type IA
[2-590] IPR0234051e-161DNA topoisomerase, type IA, core domain
[166-573] IPR0134971.1e-102DNA topoisomerase, type IA, central
[284-536] IPR0036022.1e-99DNA topoisomerase, type IA, DNA-binding
[468-586] IPR0138241.1e-44DNA topoisomerase, type IA, central region, subdomain 1
[141-238] IPR0036013.5e-34DNA topoisomerase, type IA, domain 2
[292-414] IPR0138269.7e-30DNA topoisomerase, type IA, central region, subdomain 3
[4-147] IPR0061713.5e-17Toprim domain
[642-680] IPR0106664e-09Zinc finger, GRF-type
Orthology groupMCL13699 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205918-TA
ATGAAATACTTAAATGTTGCTGAGAAAAATGATGCTGCTAAGAACATTGCAGGATTTTTATCAAATTTTAAACATAGAAGGCGAGAAGGTCTTTCTAAATTTAATAAAATTTATGAATTTGATGCTGAAGTGATGGGTCAAAGGAGCAAAATGGTTATGACTTCAGTTTCAGGGCATCTTTTAAATTATGAATTTGTAAATAAAAACGAAAGTAAAAAATGGGACGCATACGATCCCAAAAAACTATTCTATGAACCAGTCAGAAAATGCTGTCCGGATAACTATAAAAATATTAAGGAAACTCTACAAAGGGAGATTAAAGGATGTGATGGTCTTATAATATGGACAGATTGTGACAGAGAAGGTGAAAATATAGGTTTTGAAATTATAGAAGTCTGCAAAAACATTCAAAGAAATATAAATATATACCGAGCAAAATTCTCAGAGATTACTGCACAATCTGTAAGAAGAGCTCTCAGTAACTTAGGAGTTCCCGATGAACACACAAGCAAAGCTGTAGATATCAGACAGGAATTAGACTTAAGGATAGGTGCAGTTTTTACAAGATTTCAAACAGTCAAAATACAATCGTCATTTCAAAACAACGTTTCTAACAAAATAGTTAGTTTTGGTTCATGTCAGTTCCCAACACTGGGATTTGTTGTCGAAAGATGGAGGGCCATTGAAAATTTTATACCGGAAAAATTTTGGAAGTTACAAGTCAATCACACTCTCGGTAATGAGAGTACAGATTTTTTATGGGACAGGGTTAAGATATTTGATAAAGATATATGTAATATATTCTATAATATGTGCTTAGAAAATAAAACGGCCACCGTTGTTAATGTCGAGACAAAACCAAAGACCAAATGGAGGCCCCTACCTTTAGATACAGTAGAATTAGAAAAGCAAGCGTCGAGGCTATTGAAAATTAACGCGAAAACAACAATGAAGATAGCGGAGAAGTTGTATACGGCTGGTATCATAAGTTACCCGCGCACAGAGACCAACCAGTTCTCCAATGACATCAACTTAGTGAAGCTGATTGAACTTCATAAGGATGATCCTAGTTGGGGGACATTTGCGCAGAATGTTCTCTCTCAGGGACCCAACCCTAGGAGAGGAAACAAAAGCGACCAAGCCCACCCTCCCATACATCCCACAAAATATGTGACCAATCTGGTCAACATGGAGCGTCGTGTGTACGAGTTCATAGTAAGGACGTTCCTCGCCTGTTGTTCCAAGGACGCGGTCGGGAAGGAGACCACGGTCAGGCTGACGGTAGCGGACGAAGGCTTCCACGCGTCCGGCCTCATAGTCACGGAGAGGAACTACCTGGACGTGTACCCCTACGATAAATGGACCTCTAAACACATACACGACTATCAGGTTGGCGACACTTTCACAGCGACCAAAGTGGAAATGATAGAAAGTGAGACCTCCCCGCCCGAACTGCTGACAGAAGCTAATTTAATCACTCTCATGGAAAAACATGGAATAGGCACGGACGCGACGCACGCGGACCACATAGAGACTATAAAGATTCGAAACTACGTGGTCATAGAAGGAAACAAATTCAAACCGACCGAGCTAGGCAGAGGACTGGTCGAGGGATACGACATGTTAAGTCTGCCGATGTCCAAACCGCATCTGAGAGCCAACTTCGAGGCAGATCTCAAACTTATATGCGATAGGAAAAAATCCGCTGACGCGGTCTTACGTGACCAGATAGAAGAATACAAAAAGCTCTACGACAAAATGCTGTTGGAACAGAACAAGCTGATTGGTTTATGGAAACGAAGGTTGCAGAACTACACGTGGAGTGAACCACGGCCAGGTGCTGGTTCCGAGAGCAGTTCAAACGCTGCGCCGCGGAATACTCCGAGTACATCGAGCGCGTCTCGTACGGGTAGCGGGCACTCGGTGTTGTGTCACTGCAACAGACCCGCCGCGACACTAACATGCCAGAAGTCAAACGAAAACAGAGGAAGGAAGTTTTACAAGTGCCAGGAATGTAACTTTTTCAAGTGGGTAGAAAATTCTTTGCCTTCAAATGCACAGAACCCTTACGAAACTCCACCGAGTTCTGGGGGAACTAACGGCGCCGATACCAACCGACCGACCACGAGTCGTCAACCTCGTCTTTGTTCCGTGTGTCGTCGTCCAGGACACAACATAACCAACTGTCCAGCGAGAGGGGTCTGA

Protein sequence:

>DPOGS205918-PA
MKYLNVAEKNDAAKNIAGFLSNFKHRRREGLSKFNKIYEFDAEVMGQRSKMVMTSVSGHLLNYEFVNKNESKKWDAYDPKKLFYEPVRKCCPDNYKNIKETLQREIKGCDGLIIWTDCDREGENIGFEIIEVCKNIQRNINIYRAKFSEITAQSVRRALSNLGVPDEHTSKAVDIRQELDLRIGAVFTRFQTVKIQSSFQNNVSNKIVSFGSCQFPTLGFVVERWRAIENFIPEKFWKLQVNHTLGNESTDFLWDRVKIFDKDICNIFYNMCLENKTATVVNVETKPKTKWRPLPLDTVELEKQASRLLKINAKTTMKIAEKLYTAGIISYPRTETNQFSNDINLVKLIELHKDDPSWGTFAQNVLSQGPNPRRGNKSDQAHPPIHPTKYVTNLVNMERRVYEFIVRTFLACCSKDAVGKETTVRLTVADEGFHASGLIVTERNYLDVYPYDKWTSKHIHDYQVGDTFTATKVEMIESETSPPELLTEANLITLMEKHGIGTDATHADHIETIKIRNYVVIEGNKFKPTELGRGLVEGYDMLSLPMSKPHLRANFEADLKLICDRKKSADAVLRDQIEEYKKLYDKMLLEQNKLIGLWKRRLQNYTWSEPRPGAGSESSSNAAPRNTPSTSSASRTGSGHSVLCHCNRPAATLTCQKSNENRGRKFYKCQECNFFKWVENSLPSNAQNPYETPPSSGGTNGADTNRPTTSRQPRLCSVCRRPGHNITNCPARGV-