| DPOGS205984 | ||
|---|---|---|
| Transcript | DPOGS205984-TA | 456 bp |
| Protein | DPOGS205984-PA | 151 aa |
| Genomic position | DPSCF300164 + 141066-143432 | |
| RNAseq coverage | 43028x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014866 | 9e-81 | 96.69% | |
| Bombyx | BGIBMGA009411-TA | 1e-79 | 96.03% | |
| Drosophila | RpS16-PA | 2e-72 | 86.39% | |
| EBI UniRef50 | UniRef50_P62249 | 4e-66 | 82.98% | 40S ribosomal protein S16 n=451 Tax=root RepID=RS16_HUMAN |
| NCBI RefSeq | NP_001037508.1 | 5e-79 | 96.69% | ribosomal protein S16 [Bombyx mori] |
| NCBI nr blastp | gi|54039446 | 1e-78 | 98.01% | ribosomal protein S16 [Spodoptera frugiperda] |
| NCBI nr blastx | gi|54039446 | 1e-77 | 98.01% | ribosomal protein S16 [Spodoptera frugiperda] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 3.2e-101 | ribosome | |
| GO:0006412 | 3.2e-101 | translation | ||
| GO:0005622 | 3.2e-101 | intracellular | ||
| GO:0003735 | 3.2e-101 | structural constituent of ribosome | ||
| KEGG pathway | ame:726439 | 9e-72 | ||
| K02960 (RP-S16e, RPS16) | maps-> | Ribosome | ||
| InterPro domain | [5-151] IPR000754 | 3.2e-101 | Ribosomal protein S9 | |
| [13-151] IPR020568 | 2.1e-41 | Ribosomal protein S5 domain 2-type fold | ||
| [15-151] IPR014721 | 3.7e-40 | Ribosomal protein S5 domain 2-type fold, subgroup | ||
| Orthology group | MCL12081 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205984-TA
ATGGCTGCCGCGCAAGAGGCGAGACGTGAACCTATTCAGGCCGTCCAAGTATTCGGACGCAAGAAAACAGCCACCGCCGTAGCGTACTGTAAACGCGGTCGTGGAGTCCTTCGAGTCAACGGTCGTCCCCTCGACTTAGTGGAGCCCCGTCTGCTCCAATACAAACTTCAAGAACCAATCCTGTTACTGGGAAAGGAAAAGTTCTCTGGCGTAGACATCAGAGTAACTGTGAAGGGTGGTGGTCATGTCGCTCAAGTTTATGCCATCAGACAAGCCATCTCCAAAGCACTAATAGCTTTCTACCAGAAATTTGTCGACGAGGCGTCAAAGAAGGAAATCAAAGATATCCTAGTTCAGTACGACAGGAGTTTGCTGGTCGCTGACCCGAGGCGCTGCGAGCCGAAGAAATTCGGTGGACCGGGAGCTCGGGCCAGATACCAGAAATCATACCGTTAA
>DPOGS205984-PA
MAAAQEARREPIQAVQVFGRKKTATAVAYCKRGRGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKFVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR-