DPOGS206057 | ||
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Transcript | DPOGS206057-TA | 447 bp |
Protein | DPOGS206057-PA | 148 aa |
Genomic position | DPSCF300028 - 638389-638835 | |
RNAseq coverage | 2734x (Rank: top 5%) |
Annotation | ||||
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Heliconius | HMEL014071 | 1e-82 | 99.32% |   |
Bombyx | BGIBMGA006840-TA | 2e-80 | 99.31% |   |
Drosophila | eIF-1A-PB | 9e-76 | 89.19% |   |
EBI UniRef50 | UniRef50_F4WT32 | 5e-66 | 92.31% | Eukaryotic translation initiation factor 1A, X-chromosomal n=7 Tax=Opisthokonta RepID=F4WT32_ACREC |
NCBI RefSeq | NP_001093083.1 | 5e-79 | 99.31% | eukaryotic translation initiation factor 1A [Bombyx mori] |
NCBI nr blastp | gi|151301107 | 1e-77 | 99.31% | eukaryotic translation initiation factor 1A [Bombyx mori] |
NCBI nr blastx | gi|151301107 | 4e-78 | 99.31% | eukaryotic translation initiation factor 1A [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006413 | 1.3e-104 | translational initiation | |
GO:0003743 | 1.3e-104 | translation initiation factor activity | ||
GO:0003723 | 9.2e-28 | RNA binding | ||
KEGG pathway |   | |||
InterPro domain | [2-148] IPR001253 | 1.3e-104 | Translation initiation factor 1A (eIF-1A) | |
[2-143] IPR012340 | 3.1e-63 | Nucleic acid-binding, OB-fold | ||
[2-144] IPR016027 | 3.2e-53 | Nucleic acid-binding, OB-fold-like | ||
[30-94] IPR006196 | 9.2e-28 | RNA-binding domain, S1, IF1 type | ||
Orthology group | MCL13681 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206057-TA
ATGCCGAAGAATAAAGGAAAAGGAGGTAAAAACAGAAGGAGGGGGAAGAACGAAAATGAAACAGAAAAACGTGAGTTAGTTTTTAAGGAAGACGGCCAGGAGTACGCCCAAGTCACAAAGATGCTCGGTAATGGCCGCTTAGAGGCCATGTGCTTTGATGGCATAAAACGTCTTTGCCACATCAGAGGTAAATTACGAAAAAAAGTATGGATAAATCAAGGAGACATCATACTTATTGGCTTACGAGATTATCAAGACGCCAAAGCTGACGTAATTTTGAAATACACCCCTGACGAGGCAAGAAATCTTAAAACGTACGGAGAATTTCCTGAAACAGTTCGCATCAATGAGACTGTTGTATATTCTGTTGATGGTCTCGATGAAGACATCGAATTCGGAGACGAAGTCAGCTCGGAAGATGAGGCTGATGCTGTTGATGCTATATAA
>DPOGS206057-PA
MPKNKGKGGKNRRRGKNENETEKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDEADAVDAI-