| DPOGS206229 | ||
|---|---|---|
| Transcript | DPOGS206229-TA | 405 bp |
| Protein | DPOGS206229-PA | 134 aa |
| Genomic position | DPSCF300334 + 76627-78235 | |
| RNAseq coverage | 8x (Rank: top 85%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA003214-TA | 5e-22 | 50.46% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_E2ASS0 | 5e-12 | 40.43% | Mediator of RNA polymerase II transcription subunit 16 n=6 Tax=Formicidae RepID=E2ASS0_CAMFO |
| NCBI RefSeq | XP_002431828.1 | 6e-11 | 37.23% | Thyroid hormone receptor-associated protein complex 95 kDa component, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|307171840 | 2e-11 | 40.43% | Mediator of RNA polymerase II transcription subunit 16 [Camponotus floridanus] |
| NCBI nr blastx | gi|307209743 | 1e-10 | 40.43% | Mediator of RNA polymerase II transcription subunit 16 [Harpegnathos saltator] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [65-129] IPR021665 | 2.1e-08 | Mediator complex, subunit Med16 | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206229-TA
ATGTTCCGTGCTCTGCGTCCATCAGAAGAGTGTATGTCCGTCTGTTTGTCGTGGACGGCCCGCGAATGGGAGGGACCCCCACGCTGCTGTGTGTCCGCCCCCCACCCGCGACAGCTACCCCTATATCTGGAGTACGGTGTAGAGCCGGACATGTTGCGTTACGTCCCCGAGCCGCCTCCGCACGCTCAGTCTGATACCTCGGCGTCACAAGACATGGACTCCATCAGGTACATGTACCTGGGCGGGCGCGGTCGCGCCGCTCGCTGGCGGCAGTGCGGTCGCTGCGGGGCGCGCGCCCTTCCGGAGCCCCGAGCCGCACCTCACGCCCTGCAGAGGGCTTATGATGGAAGATATCTAGCACACTGCAGATGTGGAGGGAACTGGACGCTCGTGTCTAACGTCTGA
>DPOGS206229-PA
MFRALRPSEECMSVCLSWTAREWEGPPRCCVSAPHPRQLPLYLEYGVEPDMLRYVPEPPPHAQSDTSASQDMDSIRYMYLGGRGRAARWRQCGRCGARALPEPRAAPHALQRAYDGRYLAHCRCGGNWTLVSNV-