Monarch geneset OGS2.0

DPOGS206276
TranscriptDPOGS206276-TA360 bp
ProteinDPOGS206276-PA119 aa
Genomic positionDPSCF300290 + 33909-34533
RNAseq coverage1076x (Rank: top 12%)
Annotation
HeliconiusHMEL0131772e-6497.48% 
BombyxBGIBMGA010723-TA3e-5999.08% 
DrosophilaSmD2-PA2e-4487.83% 
EBI UniRef50UniRef50_D7U2964e-4381.13%Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=D7U296_VITVI
NCBI RefSeqNP_001077096.13e-5696.64%small nuclear ribonucleoprotein sm d2 [Bombyx mori]
NCBI nr blastpgi|1349486719e-5596.64%small nuclear ribonucleoprotein sm d2 [Bombyx mori]
NCBI nr blastxgi|1349486714e-5996.64%small nuclear ribonucleoprotein sm d2 [Bombyx mori]
Group
KEGG pathwayame:4140391e-49 
 K11096 (SNRPD2, SMD2)maps-> Spliceosome
InterPro domain[26-117] IPR0109205.8e-23Like-Sm ribonucleoprotein (LSM)-related domain
[32-110] IPR0066498.2e-19Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
[37-108] IPR0011631.1e-17Like-Sm ribonucleoprotein (LSM) domain
Orthology groupMCL12530 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206276-TA
ATGGCGACTACATCGAAGCCACGCTCAGAAATGACTCTAGAAGAGCTAGCTAAGATAGAAGAGGAAGAATTCAGCACAGGTCCGCTTTCGGTTCTCACACAGTCCGTCAAAAATAATACACAAGTGTTAATAAATTGTCGTAACAATAAAAAGTTATTGGGTCGTGTAAAAGCCTTTGACCGGCATTGCAACATGGTGTTAGAAAATGTTAAAGAAATGTGGACCGAAGTTCCAAGGACGGGGAAAGGCAAAAAGGGTAAAGCTGTGAACAAAGATAAGTTCATATCAAAGATGTTCCTCCGAGGTGATTCAGTTATCTTAGTCCTCAGGAATCCTCTAGCTACTGCTGCTGGAAAGTAA

Protein sequence:

>DPOGS206276-PA
MATTSKPRSEMTLEELAKIEEEEFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPRTGKGKKGKAVNKDKFISKMFLRGDSVILVLRNPLATAAGK-