| DPOGS206383 | ||
|---|---|---|
| Transcript | DPOGS206383-TA | 408 bp |
| Protein | DPOGS206383-PA | 135 aa |
| Genomic position | DPSCF300192 - 65860-66267 | |
| RNAseq coverage | 1975x (Rank: top 6%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015840 | 6e-49 | 69.29% | |
| Bombyx | BGIBMGA004541-TA | 1e-49 | 66.67% | |
| Drosophila | l(2)efl-PA | 8e-36 | 52.76% | |
| EBI UniRef50 | UniRef50_D9J2L8 | 2e-44 | 66.94% | Heat shock protein (Fragment) n=1 Tax=Actias selene RepID=D9J2L8_9NEOP |
| NCBI RefSeq | NP_001037038.1 | 2e-48 | 66.67% | heat shock protein 20.4 [Bombyx mori] |
| NCBI nr blastp | gi|301070150 | 3e-58 | 82.84% | small heat shock protein [Spodoptera litura] |
| NCBI nr blastx | gi|301070150 | 7e-57 | 82.84% | small heat shock protein [Spodoptera litura] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | dme:Dmel_CG4533 | 5e-34 | ||
| K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | ||
| InterPro domain | [23-118] IPR002068 | 3.3e-27 | Heat shock protein Hsp20 | |
| [24-44] IPR001436 | 3.9e-22 | Alpha crystallin/Heat shock protein | ||
| [9-119] IPR008978 | 2.5e-16 | HSP20-like chaperone | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206383-TA
ATGAATAGAAACTACTGCAGGCCTTGGAGAAATCTAGCGGCGGCTAACCAGGACACCGGCTCTACTATTAAGGAAGAAAAAGACAAGTTCCAAGTGAATTTGGATGTTCAGCATTTCGCCCCGGAGGAGATTTCTGTGAAAACGGCTGATGGATTTTTAATTGTTGAGGCAAAGCATGAAGAGAGACAGGACGAGCACGGATTTATATCAAGAAGTTTCACGCGAAGATATCCTTTACCAGAGGGTATTCTAGACGATTCTGTGGTTTCTAAATTGTCTTCGGACGGCGTGTTGTCTATCACAGCTCCTTTAAAGCCTCCTCCGAAAGCTTCAAGTGAGCGCGTCGTGCCAATCGTACAAACCGGGCCGGTGAGGAAGCAATCGGAGTCCCCTGAGGAGCAAGGATAA
>DPOGS206383-PA
MNRNYCRPWRNLAAANQDTGSTIKEEKDKFQVNLDVQHFAPEEISVKTADGFLIVEAKHEERQDEHGFISRSFTRRYPLPEGILDDSVVSKLSSDGVLSITAPLKPPPKASSERVVPIVQTGPVRKQSESPEEQG-