DPOGS206427 | ||
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Transcript | DPOGS206427-TA | 588 bp |
Protein | DPOGS206427-PA | 195 aa |
Genomic position | DPSCF300181 + 314999-317516 | |
RNAseq coverage | 19838x (Rank: top 0%) |
Annotation | ||||
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Heliconius | % |   | ||
Bombyx | BGIBMGA013792-TA | 4e-111 | 98.97% |   |
Drosophila | RpS11-PC | 1e-62 | 77.63% |   |
EBI UniRef50 | UniRef50_A6YPG5 | 1e-89 | 83.08% | 40S ribosomal protein S11 n=14 Tax=Eukaryota RepID=A6YPG5_TRIIF |
NCBI RefSeq | NP_001037111.1 | 9e-75 | 97.79% | ribosomal protein S11 isoform 2 [Bombyx mori] |
NCBI nr blastp | gi|149898798 | 5e-89 | 83.08% | 40S ribosomal protein S11 [Triatoma infestans] |
NCBI nr blastx | gi|270010086 | 3e-91 | 84.62% | hypothetical protein TcasGA2_TC009438 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005840 | 4.3e-97 | ribosome | |
GO:0006412 | 4.3e-97 | translation | ||
GO:0005622 | 4.3e-97 | intracellular | ||
GO:0003735 | 4.3e-97 | structural constituent of ribosome | ||
KEGG pathway | dgr:Dgri_GH22980 | 6e-73 |   | |
  | K02949 (RP-S11e, RPS11) | maps-> | Ribosome | |
InterPro domain | [44-195] IPR000266 | 4.3e-97 | Ribosomal protein S17 | |
[105-188] IPR012340 | 1.1e-35 | Nucleic acid-binding, OB-fold | ||
[93-182] IPR019978 | 1.4e-32 | Ribosomal protein S17, archaeal | ||
[106-187] IPR016027 | 1.8e-28 | Nucleic acid-binding, OB-fold-like | ||
Orthology group | MCL15244 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206427-TA
ATGGCGGATCAGACCGAACGTTCGTTTCAAAAGCAACCGACTGTCTTCTTGAACCGTAAGAAAGGCATCGGTGTCAAACGAAGCAGGAAACCGCTAAGATATCATAAAGATGTCGGACTCGGTTTCAAGACACCCAGAGAGACAGAGAAAGCGTTTCAGAAACAGGCTACGGTTTTCCTGAACCGTAAAGGCGGTTTGAAGAGGAAGGATATGAGACACCACAAAAATGTCGGTTTAGGTTTCAAGACGCCGCGTGAGGCAATTGAGGGCACATACATTGATAAGAAGTGTCCATTCACTGGGAATGTTTCCATCCGAGGCAGAATCCTAACTGGTGTCGTACAGAAGATGAAAATGCAGAGAACCATTGTCATCCGACGCGATTACCTACACTACCTGCCAAAATACAACCGTTTTGAGAAACGACACAGGAATATGTCCGTTCATCTATCACCCTGTTTCAGGGATGTTGAACTCGGAGACATCGTTACCATCGGCGAGTGCCGGCCGCTGTCCAAGACTGTGCGTTTCAACGTTCTCAAGGTCTCCAAGGGAAAAGGCTCCAAAAAGTCTTTCAAAAAATTCTAA
>DPOGS206427-PA
MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPRETEKAFQKQATVFLNRKGGLKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELGDIVTIGECRPLSKTVRFNVLKVSKGKGSKKSFKKF-