| DPOGS206461 | ||
|---|---|---|
| Transcript | DPOGS206461-TA | 522 bp |
| Protein | DPOGS206461-PA | 173 aa |
| Genomic position | DPSCF300070 + 40480-41245 | |
| RNAseq coverage | 34x (Rank: top 74%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012933 | 2e-73 | 69.11% | |
| Bombyx | % | |||
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_UPI00022C8DBA | 2e-37 | 46.55% | UPI00022C8DBA related cluster n=2 Tax=unknown RepID=UPI00022C8DBA |
| NCBI RefSeq | XP_002736022.1 | 1e-28 | 35.29% | PREDICTED: predicted protein-like isoform 1 [Saccoglossus kowalevskii] |
| NCBI nr blastp | gi|350402937 | 5e-37 | 46.55% | PREDICTED: rab-like protein 5-like [Bombus impatiens] |
| NCBI nr blastx | gi|350402937 | 6e-36 | 46.51% | PREDICTED: rab-like protein 5-like [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005525 | 2.9e-08 | GTP binding | |
| GO:0007264 | 1.6e-05 | small GTPase mediated signal transduction | ||
| KEGG pathway | ||||
| InterPro domain | [2-138] IPR006689 | 2.9e-08 | Small GTPase superfamily, ARF/SAR type | |
| Orthology group | MCL19006 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206461-TA
ATGCTGAAAATATTAATCATTGGACCATCCGATAGTGGGAAGACATCGATAGCAAATTTTCTCTCAGAATCTATGAATGTCGAAGAAGCTGGTACCCCTAGACCGACGCAAGGAGCACGCATCTTAGAATTTGAGCTCCCTCACAACGTTAACGAAAGGCAGCGTAAGGTTCAAATTGAATTGTGGGATTGCAGCGGCGACCATAAATTCGAATCATGCTGGCCAGCTGTAAGAGTTGGCATCCAAGGAGTTATTCTAGTATGTTCTGCTAACACAGTCAATGTCGCTGGACGGGAAATCGAACTGCTTTACAATTACTTCGTATCCCAGGCTAAGCTATCAGCTAAACAATGCGTTGTCTTCTACAACTGTTTAGATGATCAAGACGATATGGACTCGTTGAATCTCTCTCCAACGTTTTCAAAAGTATCCCAAGTGCCTGTTAACATCAAAACGGGAGGGAACAGATTAAAAATAGACTTTTCGAACTTTATTACATCCGTTTTGCAAAGTATTAAATAA
>DPOGS206461-PA
MLKILIIGPSDSGKTSIANFLSESMNVEEAGTPRPTQGARILEFELPHNVNERQRKVQIELWDCSGDHKFESCWPAVRVGIQGVILVCSANTVNVAGREIELLYNYFVSQAKLSAKQCVVFYNCLDDQDDMDSLNLSPTFSKVSQVPVNIKTGGNRLKIDFSNFITSVLQSIK-