| DPOGS206550 | ||
|---|---|---|
| Transcript | DPOGS206550-TA | 468 bp |
| Protein | DPOGS206550-PA | 155 aa |
| Genomic position | DPSCF300190 + 233696-234658 | |
| RNAseq coverage | 744x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002290 | 7e-83 | 91.50% | |
| Bombyx | BGIBMGA014041-TA | 7e-23 | 83.33% | |
| Drosophila | CG3887-PA | 4e-50 | 58.00% | |
| EBI UniRef50 | UniRef50_Q9VMV6 | 4e-48 | 58.00% | SelT-like protein n=17 Tax=Pancrustacea RepID=SELT_DROME |
| NCBI RefSeq | XP_974477.1 | 5e-60 | 69.33% | PREDICTED: similar to selenoprotein T [Tribolium castaneum] |
| NCBI nr blastp | gi|91083003 | 9e-59 | 69.33% | PREDICTED: similar to selenoprotein T [Tribolium castaneum] |
| NCBI nr blastx | gi|91083003 | 2e-60 | 69.33% | PREDICTED: similar to selenoprotein T [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008430 | 5.2e-64 | selenium binding | |
| GO:0045454 | 5.2e-64 | cell redox homeostasis | ||
| KEGG pathway | ||||
| InterPro domain | [3-155] IPR019389 | 5.2e-64 | Selenoprotein T | |
| [1-139] IPR011893 | 1.6e-24 | Selenoprotein, Rdx type | ||
| [98-145] IPR012336 | 3.7e-17 | Thioredoxin-like fold | ||
| Orthology group | MCL14227 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206550-TA
ATGAATATTAATTACTGTTACTCATGTGGATACAGAAAAGTTTTTGAAGACTATGCAGGAATAATACAACAAAAATATCCAGAAATTTCTGTTATTGGTGCAAATTATGACCCTCCAGGCATTAACATGTATCTGTCTAGATTGATTGGGTTTGGCAAAATGATTTTAATCATGTGCATCTTGAGTGGTGTTAATATTTTTGCCTGGTTAAACAAACCACAACCGGCCTGGTGGAATTGGTGCCTTGAGAACAAGTTATATGCTTGTATGATGATGTTTTTCTTGGCCAACATGATTGAAGGTCAACTAGTGTCGTCGGGTGCATTTGAAATATCTCTTAACAATATCCCCCTATGGTCTAAATTAGAAACTGGAAGAATTCCACAACCACCCGAACTATTTCAAATTATTGATAACACATTACAATTCTCAAAAATGGATATGAGTAATAACTTTGCAATAAATTAA
>DPOGS206550-PA
MNINYCYSCGYRKVFEDYAGIIQQKYPEISVIGANYDPPGINMYLSRLIGFGKMILIMCILSGVNIFAWLNKPQPAWWNWCLENKLYACMMMFFLANMIEGQLVSSGAFEISLNNIPLWSKLETGRIPQPPELFQIIDNTLQFSKMDMSNNFAIN-