| DPOGS206719 | ||
|---|---|---|
| Transcript | DPOGS206719-TA | 759 bp |
| Protein | DPOGS206719-PA | 252 aa |
| Genomic position | DPSCF300320 - 86996-87754 | |
| RNAseq coverage | 542x (Rank: top 23%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005143 | 2e-151 | 100.00% | |
| Bombyx | BGIBMGA002878-TA | 2e-151 | 100.00% | |
| Drosophila | sina-PA | 8e-134 | 89.24% | |
| EBI UniRef50 | UniRef50_Q8IUQ4 | 4e-132 | 87.50% | E3 ubiquitin-protein ligase SIAH1 n=50 Tax=Euteleostomi RepID=SIAH1_HUMAN |
| NCBI RefSeq | XP_394284.2 | 5e-141 | 92.03% | PREDICTED: similar to Ubiquitin ligase SIAH1 (Seven in absentia homolog 1) (Siah-1) (Siah-1a) [Apis mellifera] |
| NCBI nr blastp | gi|307173017 | 1e-140 | 92.83% | E3 ubiquitin-protein ligase SIAH1 [Camponotus floridanus] |
| NCBI nr blastx | gi|332016238 | 2e-140 | 92.83% | E3 ubiquitin-protein ligase SIAH1 [Acromyrmex echinatior] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 1.3e-196 | nucleus | |
| GO:0006511 | 1.3e-196 | ubiquitin-dependent protein catabolic process | ||
| GO:0007275 | 1.3e-196 | multicellular organismal development | ||
| GO:0005515 | 2.4e-61 | protein binding | ||
| GO:0016567 | 2.1e-21 | protein ubiquitination | ||
| GO:0008270 | 2.1e-21 | zinc ion binding | ||
| GO:0004842 | 2.1e-21 | ubiquitin-protein ligase activity | ||
| KEGG pathway | ame:410808 | 1e-140 | ||
| K04506 (SIAH1) | maps-> | Ubiquitin mediated proteolysis | ||
| Wnt signaling pathway | ||||
| p53 signaling pathway | ||||
| InterPro domain | [4-251] IPR004162 | 1.3e-196 | Seven-in-absentia protein, sina | |
| [52-248] IPR018121 | 1.7e-77 | Seven-in-absentia protein, TRAF-like domain | ||
| [63-252] IPR008974 | 2.4e-61 | TRAF-like | ||
| [125-250] IPR013322 | 2.5e-60 | TRAF-type | ||
| [70-118] IPR013323 | 2.1e-21 | Seven In Absentia Homolog-type | ||
| Orthology group | MCL12614 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206719-TA
ATGTCCGCAGACCTAGCGTCACTGTTCGAATGCCCGGTGTGTTTCGATTATGTACTGCCACCCATCCTGCAATGCCAAAGCGGGCACCTCGTGTGCTCGAGCTGTCGCCCCAAATTGTCCTGCTGCCCGACCTGCCGCGGCCCCCTCGGCAACATCCGCAACCTGGCCATGGAAAAAGTTGCTAGTAACGTAATGTTTCCTTGCAAGCATTCTAACACAGGTTGCACAGTCACCCTTGTCCATACAGAAAAAGCGGAACATGAGGAAGCATGTGAGTTCAGGCCCTATTCCTGCCCCTGTCCAGGAGCCTCATGCAAGTGGCAAGGTGGTCTGGACCAGGTTATGCCACACCTTATGATGTCTCACAAAAGCATTACAACGCTGCAAGGTGAAGATATAGTGTTTCTGGCTACTGACATTAATCTGCCCGGAGCTGTCGATTGGGTGATGATGCAGTCTTGTTTCAATCATCATTTTATGTTAGTACTAGAGAAGCAAGAAAAATTTGATGGCCACCAGCAATTTTTTGCCATTGTTCAACTAATAGGTTCACGAAAGGAAGCCGAGAATTTTGCATATCGGCTTGAACTGAATGGTCACAGACGAAGGCTAACCTGGGAGGCGATGCCACGTTCCATACATGAGGGTGTTTCATCGGCCATTATGAACTCTGATTGTCTTGTGTTCGACACCTCCCTTGCACAACTGTTTGCGGACAACGGGAACCTCGGAATAAATGTCACAATATCTATTGCTTAA
>DPOGS206719-PA
MSADLASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGGLDQVMPHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFNHHFMLVLEKQEKFDGHQQFFAIVQLIGSRKEAENFAYRLELNGHRRRLTWEAMPRSIHEGVSSAIMNSDCLVFDTSLAQLFADNGNLGINVTISIA-