DPOGS206719 | ||
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Transcript | DPOGS206719-TA | 759 bp |
Protein | DPOGS206719-PA | 252 aa |
Genomic position | DPSCF300320 - 86996-87754 | |
RNAseq coverage | 542x (Rank: top 23%) |
Annotation | ||||
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Heliconius | HMEL005143 | 2e-151 | 100.00% |   |
Bombyx | BGIBMGA002878-TA | 2e-151 | 100.00% |   |
Drosophila | sina-PA | 8e-134 | 89.24% |   |
EBI UniRef50 | UniRef50_Q8IUQ4 | 4e-132 | 87.50% | E3 ubiquitin-protein ligase SIAH1 n=50 Tax=Euteleostomi RepID=SIAH1_HUMAN |
NCBI RefSeq | XP_394284.2 | 5e-141 | 92.03% | PREDICTED: similar to Ubiquitin ligase SIAH1 (Seven in absentia homolog 1) (Siah-1) (Siah-1a) [Apis mellifera] |
NCBI nr blastp | gi|307173017 | 1e-140 | 92.83% | E3 ubiquitin-protein ligase SIAH1 [Camponotus floridanus] |
NCBI nr blastx | gi|332016238 | 2e-140 | 92.83% | E3 ubiquitin-protein ligase SIAH1 [Acromyrmex echinatior] |
Group | ||||
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Gene Ontology | GO:0005634 | 1.3e-196 | nucleus | |
GO:0006511 | 1.3e-196 | ubiquitin-dependent protein catabolic process | ||
GO:0007275 | 1.3e-196 | multicellular organismal development | ||
GO:0005515 | 2.4e-61 | protein binding | ||
GO:0016567 | 2.1e-21 | protein ubiquitination | ||
GO:0008270 | 2.1e-21 | zinc ion binding | ||
GO:0004842 | 2.1e-21 | ubiquitin-protein ligase activity | ||
KEGG pathway | ame:410808 | 1e-140 |   | |
  | K04506 (SIAH1) | maps-> | Ubiquitin mediated proteolysis | |
  |   |   | Wnt signaling pathway | |
  |   |   | p53 signaling pathway | |
InterPro domain | [4-251] IPR004162 | 1.3e-196 | Seven-in-absentia protein, sina | |
[52-248] IPR018121 | 1.7e-77 | Seven-in-absentia protein, TRAF-like domain | ||
[63-252] IPR008974 | 2.4e-61 | TRAF-like | ||
[125-250] IPR013322 | 2.5e-60 | TRAF-type | ||
[70-118] IPR013323 | 2.1e-21 | Seven In Absentia Homolog-type | ||
Orthology group | MCL12614 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206719-TA
ATGTCCGCAGACCTAGCGTCACTGTTCGAATGCCCGGTGTGTTTCGATTATGTACTGCCACCCATCCTGCAATGCCAAAGCGGGCACCTCGTGTGCTCGAGCTGTCGCCCCAAATTGTCCTGCTGCCCGACCTGCCGCGGCCCCCTCGGCAACATCCGCAACCTGGCCATGGAAAAAGTTGCTAGTAACGTAATGTTTCCTTGCAAGCATTCTAACACAGGTTGCACAGTCACCCTTGTCCATACAGAAAAAGCGGAACATGAGGAAGCATGTGAGTTCAGGCCCTATTCCTGCCCCTGTCCAGGAGCCTCATGCAAGTGGCAAGGTGGTCTGGACCAGGTTATGCCACACCTTATGATGTCTCACAAAAGCATTACAACGCTGCAAGGTGAAGATATAGTGTTTCTGGCTACTGACATTAATCTGCCCGGAGCTGTCGATTGGGTGATGATGCAGTCTTGTTTCAATCATCATTTTATGTTAGTACTAGAGAAGCAAGAAAAATTTGATGGCCACCAGCAATTTTTTGCCATTGTTCAACTAATAGGTTCACGAAAGGAAGCCGAGAATTTTGCATATCGGCTTGAACTGAATGGTCACAGACGAAGGCTAACCTGGGAGGCGATGCCACGTTCCATACATGAGGGTGTTTCATCGGCCATTATGAACTCTGATTGTCTTGTGTTCGACACCTCCCTTGCACAACTGTTTGCGGACAACGGGAACCTCGGAATAAATGTCACAATATCTATTGCTTAA
>DPOGS206719-PA
MSADLASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGGLDQVMPHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFNHHFMLVLEKQEKFDGHQQFFAIVQLIGSRKEAENFAYRLELNGHRRRLTWEAMPRSIHEGVSSAIMNSDCLVFDTSLAQLFADNGNLGINVTISIA-