| DPOGS206724 | ||
|---|---|---|
| Transcript | DPOGS206724-TA | 333 bp |
| Protein | DPOGS206724-PA | 110 aa |
| Genomic position | DPSCF300320 - 8762-9171 | |
| RNAseq coverage | 0x (Rank: top 97%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA008083-TA | 2e-20 | 51.02% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_UPI0001923E16 | 9e-12 | 44.44% | UPI0001923E16 related cluster n=5 Tax=unknown RepID=UPI0001923E16 |
| NCBI RefSeq | XP_002167973.1 | 1e-12 | 44.44% | PREDICTED: similar to polyprotein [Hydra magnipapillata] |
| NCBI nr blastp | gi|339234118 | 9e-13 | 38.17% | putative integrase core domain protein [Trichinella spiralis] |
| NCBI nr blastx | gi|348545569 | 2e-18 | 50.00% | PREDICTED: hypothetical protein LOC100709671 [Oreochromis niloticus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 4.1e-08 | nucleic acid binding | |
| KEGG pathway | ||||
| InterPro domain | [44-110] IPR012337 | 4.1e-08 | Ribonuclease H-like | |
| Orthology group | MCL14530 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206724-TA
ATGTGCACAGAAGTCTTCGCTATTCCTAACCTAACCGAGAAGCGTCAAGGGTTGCCGAAAAGCTTGTGCATGAAGTTTTCTGTCGGTTTGGAGTGCCAATTGAAATTCACGGCGATCAAGGAACGAATCTCGAACGGAATGGTGGAACGGTTTAACCAAACATTGTTGAGGTATCTGGCAAAGGTAATTGAAGACAAACAGAACGATTGGGACAAGCACATTCAGCCATTCCTCCTATCATACCGAAGTGCTGTTCAAGAAACCTCAACAGTAACACCGGCTTTCGCAAACTTTGGGAGAGAATTGCGATTACTAGCTGACCTGATTACTTGA
>DPOGS206724-PA
MCTEVFAIPNLTEKRQGLPKSLCMKFSVGLECQLKFTAIKERISNGMVERFNQTLLRYLAKVIEDKQNDWDKHIQPFLLSYRSAVQETSTVTPAFANFGRELRLLADLIT-