DPOGS206765 | ||
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Transcript | DPOGS206765-TA | 195 bp |
Protein | DPOGS206765-PA | 64 aa |
Genomic position | DPSCF301681 - 584-778 | |
RNAseq coverage | 272x (Rank: top 40%) |
Annotation | ||||
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Heliconius | HMEL012940 | 2e-15 | 97.22% |   |
Bombyx | BGIBMGA005342-TA | 5e-15 | 91.67% |   |
Drosophila | calypso-PA | 8e-11 | 74.29% |   |
EBI UniRef50 | UniRef50_E0VC78 | 3e-10 | 62.75% | Predicted protein n=10 Tax=Eukaryota RepID=E0VC78_PEDHC |
NCBI RefSeq | XP_002401745.1 | 2e-11 | 80.56% | ubiquitin C-terminal hydrolase, putative [Ixodes scapularis] |
NCBI nr blastp | gi|241758146 | 6e-10 | 80.56% | ubiquitin C-terminal hydrolase, putative [Ixodes scapularis] |
NCBI nr blastx | gi|241758146 | 7e-12 | 66.10% | ubiquitin C-terminal hydrolase, putative [Ixodes scapularis] |
Group | ||||
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Gene Ontology | GO:0006511 | 3.1e-16 | ubiquitin-dependent protein catabolic process | |
GO:0005622 | 3.1e-16 | intracellular | ||
GO:0004221 | 3.1e-16 | ubiquitin thiolesterase activity | ||
KEGG pathway |   | |||
InterPro domain | [1-62] IPR001578 | 3.1e-16 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | |
Orthology group | MCL26642 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206765-TA
GTGGACGACTGCCGTCGCACTCACAACTACGACGAATTCATCTGCACTTTCCTATCAATGTTGGCTGAGCGAGGTGTGCTGGCGGAGCTGGTGACCGCTCAGCTGGAGAGGGGCCGGAGCGCGAGAGTAAGGAGACGAAGACCTCGACCGAGGCCTAGGGCCAGGCCGAGACCGAGGCCCAGGACGAGAAAGTGA
>DPOGS206765-PA
VDDCRRTHNYDEFICTFLSMLAERGVLAELVTAQLERGRSARVRRRRPRPRPRARPRPRPRTRK-