Monarch geneset OGS2.0

DPOGS206841
TranscriptDPOGS206841-TA2295 bp
ProteinDPOGS206841-PA764 aa
Genomic positionDPSCF300001 - 3183035-3185329
RNAseq coverage46x (Rank: top 71%)
Annotation
HeliconiusHMEL0132740.092.16% 
BombyxBGIBMGA013073-TA0.088.37% 
Drosophilaokr-PA0.058.32% 
EBI UniRef50UniRef50_O764600.058.32%DNA repair and recombination protein RAD54-like n=19 Tax=Eumetazoa RepID=RAD54_DROME
NCBI RefSeqXP_001661961.10.067.56%steroid receptor-interacting snf2 domain protein [Aedes aegypti]
NCBI nr blastpgi|1571306800.067.56%steroid receptor-interacting snf2 domain protein [Aedes aegypti]
NCBI nr blastxgi|1571306800.066.32%steroid receptor-interacting snf2 domain protein [Aedes aegypti]
Group
Gene OntologyGO:00036777.8e-88DNA binding
GO:00055247.8e-88ATP binding
GO:00043861.4e-20helicase activity
GO:00036761.4e-20nucleic acid binding
GO:00168173.8e-07hydrolase activity, acting on acid anhydrides
KEGG pathwayaag:AaeL_AAEL0026470.0 
 K10875 (RAD54L, RAD54)maps-> Homologous recombination
InterPro domain[137-445] IPR0003307.8e-88SNF2-related
[130-339] IPR0140011.8e-36DEAD-like helicase
[511-595] IPR0016501.4e-20Helicase, C-terminal
[40-105] IPR0139673.8e-07Rad54, N-terminal
Orthology groupMCL12297 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206841-TA
ATGCGACGAAGTTTGGCTCCTAGCCAAATAGGTTCCGGAGACACTGTCTTCAAGAGCCCATTAATAAATTCGAGTAACAGAAAAAAGAGGGAATGTAATGCAAGAATACCACTTGCGCAGAAATCTCTGTCTCAACTCTCCACATCTGAGCACGAGAATCTCATTAAACAAATTTTAAGTAAACCATTTAAAGTTCCTCTTCCAAACTATGTCTCGTCGTATTGTAGCAAAAGTCTAGGATTAAAAAGAACTCAAGTGCGCCGGCCTTTGCATGATCCCGATGAGCCCAATGCGCTTGTTTTATATCGCCCTCCATACATGCCGGAACATGAAAAAATGAAGATGAATGCAAACGAGATAAAAGTAGCAGTTGTTGTTGATCCAGTGCTTGGTAACATACTGAGACCCCATCAAAGGGAAGGAGTAAAGTTTATGTATGACTGTGTAACTGGAGCTCAGATTGATAATGCATATGGATGTATCATGGCAGATGAAATGGGGTTAGGAAAGACATTGCAATGTATAACATTGTTATGGACTCTGTTACGGCAAGGACCAGATTGCAAGCCAACTATATGCAAAGCTATAATTGTTTGCCCCAGTAGCTTAGTGAAGAATTGGTACAATGAAATAGGGAAGTGGCTTGGGCAAAGGATTAATGCATTGCCTATGGATGGTGGTTCAAAAGCTGAAATTACTTTGAAGCTTCAACAATTTATGAACACTTTTGCAGCTATAAGAGTTGCTACACCAGTTCTCATCATATCATATGAAACATTTAGGATATATTCTAATATCTTACATGCATCAGAAGTTGGTTTAGTGTTATGTGATGAGGGTCATAGACTGAAGAACAGTGAGAATCAGACATACCAAGCTTTGATGGGCTTAAAGGCTAAGAGAAGGATCCTCATTTCAGGAACCCCTATCCAGAATGATTTGACAGAGTATTTCAGCTTGGTACACTTTGTGAATAGTGGCATTCTTGGTACTGCTCAAGATTTTAAGAAGAGGTATGAGAATCCAATATTAAAAGGACAAGATGCGTTAGCTACACCACAAGAAAGGCAAAAGGCTCAGGAATGTCTTCAAACACTGACATCAATAGTCAATAAATGTATGATACGAAGAACTAGTAGTCTGCTTACAAAATACTTGCCGGTTAAGTTTGAACAAGTCATCTGTGTGAAAATGACACCTCTTCAAACACAGTTATATAGAAACTTCATTAATTCTGATGCCATTAAAAATAAGTTTGCTGGAACAGGGGACAAGAATACTTTGAGTGCCCTTTCAAGTATTACCATGCTGAAGAAATTGTGTAATCACCCAGATTTAGTCTACGATAAAATCATGGAAAGATCTGAAGGTTTTGAAAAAGGGAAAGACTTGTTACCAAGCAATTACGACATAAAGGACGTAAGGCCAGAGTATTCTGGAAAACTAATGATATTGGATTGTATTTTGGCTAATTTAAAAACTAATACCGATGACAAAATTGTTCTTGTATCAAACTACACACAGACTCTTGATCTTTTTGAGAAATTGTGCCGTAAACGCTGTTATCAATATGTGCGTTTGGATGGCTCTATGACTATAAAGAAAAGAGCTAAAGTTGTCGAAAGCTTTAACAGTAAGGAGTCGAAGGAGTGGATATTCATGTTAAGTTCTAAAGCTGGTGGCTGTGGATTGAATCTTATTGGCGCGAATCGACTTATTATGTTTGACCCAGATTGGAATCCCGCTAATGACGACCAGGCCATGGCAAGAGTATGGCGAGATGGTCAAAAGAAACCGTGCTACATCTACCGTTTGTTAGCCACAGGGACAATAGAAGAGAAAATATTTCAACGTCAAGCACATAAAAAAGCTCTTAGCGATACTGTCGTGGACCAAAATGAGGACTCCATGCGACATTTTACATCTGATGATTTGAAAGACTTGTTCCGGTTAGAAGATAACACACTTTCAGATACTCACAGCAAATTTAAGTGTAAGCGATGTGTTAACAATATTCAAGTCACTTTGCCTCCTGAAAATTCGGACTGCACATCAGATCTATCTAACTGGTATCACTGTGCAGATAAAAAGAATTTAGCTGATCTAGTATTAAAACAATGCTGGGATCTCGCTAAAAGTATTTCTTTCGTTTTCCACCATCGATCAGCACAAACAGAAGCAGAAATGGGCAAAGAAGAGAATAAGGAAAATGTCCAACAATGTAAAAGAAGGAAAATTGATATTGATGAGGATTACTCTGAACCCGATGACAGTGCTGATGAAGATTATCATTAA

Protein sequence:

>DPOGS206841-PA
MRRSLAPSQIGSGDTVFKSPLINSSNRKKRECNARIPLAQKSLSQLSTSEHENLIKQILSKPFKVPLPNYVSSYCSKSLGLKRTQVRRPLHDPDEPNALVLYRPPYMPEHEKMKMNANEIKVAVVVDPVLGNILRPHQREGVKFMYDCVTGAQIDNAYGCIMADEMGLGKTLQCITLLWTLLRQGPDCKPTICKAIIVCPSSLVKNWYNEIGKWLGQRINALPMDGGSKAEITLKLQQFMNTFAAIRVATPVLIISYETFRIYSNILHASEVGLVLCDEGHRLKNSENQTYQALMGLKAKRRILISGTPIQNDLTEYFSLVHFVNSGILGTAQDFKKRYENPILKGQDALATPQERQKAQECLQTLTSIVNKCMIRRTSSLLTKYLPVKFEQVICVKMTPLQTQLYRNFINSDAIKNKFAGTGDKNTLSALSSITMLKKLCNHPDLVYDKIMERSEGFEKGKDLLPSNYDIKDVRPEYSGKLMILDCILANLKTNTDDKIVLVSNYTQTLDLFEKLCRKRCYQYVRLDGSMTIKKRAKVVESFNSKESKEWIFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKPCYIYRLLATGTIEEKIFQRQAHKKALSDTVVDQNEDSMRHFTSDDLKDLFRLEDNTLSDTHSKFKCKRCVNNIQVTLPPENSDCTSDLSNWYHCADKKNLADLVLKQCWDLAKSISFVFHHRSAQTEAEMGKEENKENVQQCKRRKIDIDEDYSEPDDSADEDYH-