DPOGS206895 | ||
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Transcript | DPOGS206895-TA | 465 bp |
Protein | DPOGS206895-PA | 154 aa |
Genomic position | DPSCF300001 - 1815775-1816627 | |
RNAseq coverage | 1201x (Rank: top 11%) |
Annotation | ||||
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Heliconius | HMEL005107 | 5e-27 | 42.86% |   |
Bombyx | BGIBMGA012852-TA | 5e-87 | 98.70% |   |
Drosophila | UbcD10-PA | 1e-74 | 83.12% |   |
EBI UniRef50 | UniRef50_P68036 | 1e-74 | 83.77% | Ubiquitin-conjugating enzyme E2 L3 n=207 Tax=Eukaryota RepID=UB2L3_HUMAN |
NCBI RefSeq | NP_001037390.1 | 1e-85 | 98.70% | ubiquitin-conjugating enzyme E2L [Bombyx mori] |
NCBI nr blastp | gi|112983864 | 3e-84 | 98.70% | ubiquitin-conjugating enzyme E2L [Bombyx mori] |
NCBI nr blastx | gi|112983864 | 2e-84 | 98.70% | ubiquitin-conjugating enzyme E2L [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016881 | 2.2e-43 | acid-amino acid ligase activity | |
KEGG pathway | tca:660484 | 5e-81 |   | |
  | K04552 (UBE2L3, UBCH7) | maps-> | Ubiquitin mediated proteolysis | |
  |   |   | Parkinson's disease | |
InterPro domain | [2-148] IPR016135 | 2.8e-50 | Ubiquitin-conjugating enzyme/RWD-like | |
[6-142] IPR000608 | 2.2e-43 | Ubiquitin-conjugating enzyme, E2 | ||
Orthology group | MCL12856 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206895-TA
ATGGCTGCAACACGGAGACTTCAAAAGGAACTAAACGATATCAGACAATCAGGACTGAAATCTTTTAGAGATATCCAAGTTGATGAGTCGAATATTCTAACATGGCAAGGGTTAATTGTTCCTGACAATCCCCCGTACAACAAAGGTGCCTTTCGTATTGAAATAAACTTTCCAGCTGAATATCCATTTAAACCCCCTAAGATAAGTTTCAAAACAAGAATTTATCATCCTAATATAGATGAAAAAGGCCAAGTTTGCCTTCCCATCATTAGTGCAGAAAATTGGAAACCAGCTACAAAGACTGATCAAGTGATTCAAGCTCTAGTAGCTCTTGTAAATGATCCCGAACCTGAACATCCATTGCGGGCTGAACTAGCCGAAGAATTCCTTAAAGATAGGAAAAAGTTTTCAAAAAATGCTGAAGAATTTACTAAGAAACATAGTGAAAAGCGGCCTACTGATTAG
>DPOGS206895-PA
MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTRIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFSKNAEEFTKKHSEKRPTD-