| DPOGS206983 | ||
|---|---|---|
| Transcript | DPOGS206983-TA | 405 bp |
| Protein | DPOGS206983-PA | 134 aa |
| Genomic position | DPSCF300001 + 434311-435712 | |
| RNAseq coverage | 4556x (Rank: top 3%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002125 | 6e-32 | 54.69% | |
| Bombyx | BGIBMGA012944-TA | 4e-27 | 44.70% | |
| Drosophila | fabp-PC | 2e-10 | 36.44% | |
| EBI UniRef50 | UniRef50_P31416 | 8e-27 | 48.12% | Fatty acid-binding protein 1 n=4 Tax=Bombycoidea RepID=FABP1_MANSE |
| NCBI RefSeq | NP_001037574.1 | 1e-25 | 44.70% | fatty acid binding protein [Bombyx mori] |
| NCBI nr blastp | gi|399472 | 2e-27 | 48.12% | fatty acid binding protein 2 [Manduca sexta] |
| NCBI nr blastx | gi|157831955 | 6e-28 | 49.24% | Chain A, Crystallization, Structure Determination And Least-Squares Refinement To 1.75 Angstroms Resolution Of The Fatty-Acid- Binding Protein Isolated From Manduca Sexta L |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005488 | 1.1e-27 | binding | |
| KEGG pathway | rno:79131 | 4e-08 | ||
| K08752 (FABP3) | maps-> | PPAR signaling pathway | ||
| InterPro domain | [1-133] IPR011038 | 6.9e-29 | Calycin-like | |
| [2-132] IPR012674 | 1.1e-27 | Calycin | ||
| Orthology group | MCL18528 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206983-TA
ATGGCTTTTTTGGGCATTACATACTCTCTTGACAGAGACGAGAATTTCGACAAATTTGTCGACAGTTTGGATATCCCTGAAGATAAGAAACAGCTATTGCTTTCTTTTAAACCATCCCAGTCGATTAAAAAGGAAGGTGATGGGTATGTCCTAAGCACCACAAGCCCTGGTGGTGGCAACAAGGATTTAAAATTCCAAGACGGTGTTGAGTTTGATGAGGAAGTTGCTCCAGGCGTCGTTGCAAAATCTACTTTCAAAGTTGAAGGCAATGTCGTAACCCAAGTTCAAAACCTTGGTGATCTTGTCCTCACCTACAAGAGGGAATATTCTAACGATCAACTCGTCGTGGTTCTTACATCCAGCAAATGGGACGGAGTCGCACGGAGATACTACAAATCGGTCTAA
>DPOGS206983-PA
MAFLGITYSLDRDENFDKFVDSLDIPEDKKQLLLSFKPSQSIKKEGDGYVLSTTSPGGGNKDLKFQDGVEFDEEVAPGVVAKSTFKVEGNVVTQVQNLGDLVLTYKREYSNDQLVVVLTSSKWDGVARRYYKSV-