DPOGS206997 | ||
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Transcript | DPOGS206997-TA | 399 bp |
Protein | DPOGS206997-PA | 132 aa |
Genomic position | DPSCF300001 + 896297-902684 | |
RNAseq coverage | 19489x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL002112 | 3e-71 | 98.48% |   |
Bombyx | BGIBMGA013111-TA | 8e-35 | 76.19% |   |
Drosophila | fabp-PC | 7e-24 | 53.39% |   |
EBI UniRef50 | UniRef50_B6CMG0 | 7e-66 | 91.67% | Fatty acid-binding protein 3 n=7 Tax=Neoptera RepID=B6CMG0_HELAM |
NCBI RefSeq | NP_001011630.1 | 8e-37 | 56.49% | fatty acid binding protein [Apis mellifera] |
NCBI nr blastp | gi|3115357 | 6e-67 | 94.70% | cellular retinoic acid binding protein [Manduca sexta] |
NCBI nr blastx | gi|3115357 | 1e-65 | 94.70% | cellular retinoic acid binding protein [Manduca sexta] |
Group | ||||
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Gene Ontology | GO:0005488 | 3.5e-50 | binding | |
GO:0008289 | 1.1e-17 | lipid binding | ||
GO:0006810 | 1.1e-17 | transport | ||
GO:0005215 | 1.1e-17 | transporter activity | ||
KEGG pathway | dre:171478 | 5e-25 |   | |
  | K08752 (FABP3) | maps-> | PPAR signaling pathway | |
InterPro domain | [1-130] IPR012674 | 3.5e-50 | Calycin | |
[1-130] IPR011038 | 4.7e-45 | Calycin-like | ||
[7-130] IPR000566 | 1.4e-19 | Lipocalin/cytosolic fatty-acid binding protein domain | ||
[4-26] IPR000463 | 1.1e-17 | Cytosolic fatty-acid binding | ||
Orthology group | MCL10616 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206997-TA
ATGGAATTCGTTGGCAAGAAATACAAAATGGTCTCCTCTGAGAACTTCGATGAGTTCATGAAGACTATTGGCGTTGGTCTCATCACCCGTAAGGCCGCTAATGCGGTAACGCCGACTGTGGAGCTGCGTCAGGACGGGGACAACTTTGTCCTAGTGACGTCATCCACCTTCAAGACCACGGAGATGAAGTTCAAGCCCGGTGAGGAATTTGACGAGGAGCGCGCTGATGGTGCCAAGGTGAAGTCCGTTTGCACCTTCGAAGGGAACACCTTGAAGCAGGTTCAGAAAGCCGCTGACGGGCTGGAGGTCACCTACGTCAGGGAATTCGGCCCCGAAGAGATGAAGGCTGTTATGACAGCTAAGGATGTAACTTGCACAAGAGTGTACAAGGTACAATAA
>DPOGS206997-PA
MEFVGKKYKMVSSENFDEFMKTIGVGLITRKAANAVTPTVELRQDGDNFVLVTSSTFKTTEMKFKPGEEFDEERADGAKVKSVCTFEGNTLKQVQKAADGLEVTYVREFGPEEMKAVMTAKDVTCTRVYKVQ-