DPOGS207010 | ||
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Transcript | DPOGS207010-TA | 5088 bp |
Protein | DPOGS207010-PA | 1695 aa |
Genomic position | DPSCF300001 + 1127856-1145330 | |
RNAseq coverage | 1693x (Rank: top 8%) |
Annotation | ||||
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Heliconius | HMEL015464 | 0.0 | 89.39% |   |
Bombyx | BGIBMGA012935-TA | 0.0 | 95.58% |   |
Drosophila | Chc-PD | 0.0 | 84.79% |   |
EBI UniRef50 | UniRef50_P29742 | 0.0 | 84.79% | Clathrin heavy chain n=181 Tax=root RepID=CLH_DROME |
NCBI RefSeq | NP_001136443.1 | 0.0 | 95.58% | clathrin heavy chain [Bombyx mori] |
NCBI nr blastp | gi|219362829 | 0.0 | 95.58% | clathrin heavy chain [Bombyx mori] |
NCBI nr blastx | gi|219362829 | 0.0 | 95.58% | clathrin heavy chain [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006886 | 3.9e-184 | intracellular protein transport | |
GO:0030132 | 3.9e-184 | clathrin coat of coated pit | ||
GO:0030130 | 3.9e-184 | clathrin coat of trans-Golgi network vesicle | ||
GO:0005198 | 3.9e-184 | structural molecule activity | ||
GO:0016192 | 3.9e-184 | vesicle-mediated transport | ||
GO:0005488 | 2.7e-147 | binding | ||
KEGG pathway | tca:656193 | 0.0 |   | |
  | K04646 (CLTC) | maps-> | Huntington's disease | |
  |   |   | Endocytosis | |
  |   |   | Lysosome | |
  |   |   | Bacterial invasion of epithelial cells | |
InterPro domain | [1-1692] IPR016341 | 0 | Clathrin, heavy chain | |
[2-354] IPR016025 | 3.9e-184 | Clathrin, heavy chain, linker/propeller domain | ||
[1203-1542] IPR011990 | 2.7e-147 | Tetratricopeptide-like helical | ||
[3-336] IPR001473 | 1.9e-144 | Clathrin, heavy chain, propeller, N-terminal | ||
[1202-1537] IPR016024 | 8.9e-121 | Armadillo-type fold | ||
[355-500] IPR012331 | 2.4e-77 | Clathrin, heavy chain, linker | ||
[985-1130] IPR000547 | 2.4e-43 | Clathrin, heavy chain/VPS, 7-fold repeat | ||
[337-360] IPR015348 | 5.8e-11 | Clathrin, heavy chain, linker, core motif | ||
[155-193] IPR022365 | 1.2e-06 | Clathrin, heavy chain, propeller repeat | ||
Orthology group | MCL12071 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207010-TA
ATGGCTCAGGTGTTGCCAATACGCTTCCAGGAGCATTTACAGCTCACAAATATAGGTATAAATCCCGCTTCAATATCATTCAACACCCTGACCATGGAGTCAGATAAGTTCATCTGTGTCCGTGAGAAGGTGGGTGACACCTCGGAGGTTGTCATCATTGACATGGCGGATCCCACCAACCCCATAAGGAGACCCATCAGCGCTGACTCTGCCATCATGAACCCAGCTAGCAAAGTCATCGCTCTCAAGGGAAAGGCTGGAGTGGAAGCGCAAAAGACCCTCCAAATATTCAACATTGAAATGAAATCCAAGATGAAGGCGCACACTATGACCGAGGATGTAGTTTTCTGGAAGTGGATCTCGCCTAACACTTTGGCCCTGGTGACCAAAATATCAGTATACCACTGGTCCATGGAGGGGGATTCGACACCAGTCAAGATGTTCGATAGACATTCATCTCTCGCTGAGTGTCAGATTATCAACTACAGAACCGATCCTAAGCAGCAGTGGCTGCTACTTGTCGGTATCTCGGCGCAACAGAACCGTGTTGTGGGCGCGATGCAGTTGTACTCAGTTGAGCGGAAGTGTTCTCAGCCGATCGAAGGTCATGCTGCTTCGTTCGCGACCTTCAAGGCTGAGGGTAACGCTGAGCTGTCTACGCTGTTTTGTTTCGCTGTGAGGACAGCACAGGGCGGGAAGCTGCACATCATCGAGGTTGGTCAGACCCCAGCCGGTAACCAGCAGTTCCCTAAGAAAGCGGTGGACGTTTTCTTCCCGGCTGAAGCCCAGAACGATTTCCCGGTCGCCATGCAAGTGTCGCCCAAATATGACGTCATCTACCTGATCACCAAATACGGTTACATCCATATGTACGACATCGAAACCGGCACATGCATTTATATGAATCGCATCTCCTCTGACACTATATTCGTGACAGCACCCCACGAATCGACCGGCGGAATTATTGGTGTGAACCGCAAGGGACAAGTTCTGTCTGTGACGGTGGAAGAGGAGTCCATAGTGCCGTACATCAACACGGTGCTGCAGAACCCTGAACTGGCGCTCCGGCTGGCTGTGAGGAATAACCTGGCCGGTGCCGAGGAGTTGTTCGTCAGGAAATTCAACATGCTGTTCACCAACGGACAGTACGGAGAGGCAGCTAAGGTAGCGGCTATGGCTCCGCGCGGGATCCTCCGTACGCCGCAGACGATCCAGCGGTTCCAGCAGGTGCCCACCCAGCCCGGCCAGACCTCCCCGCTGTTGCAGTACTTCGGCATCCTGTTGGACCAAGCACAGCTCAACAAGTTCGAATCGCTGGAGTTGTGCCGACCTGTACTTCTGCAAGGTCGCAAGCAACTATTGGAGAAATGGCTGAAGGAAGAGAAATTGGAATGTTCAGAGGAACTGGGAGACCTTGTGAAGCAGGTCGATCCCACTCTGGCACTATCAGTTTATTTAAGGGCGAATGTAGCTGCCAAAGTGATCCAATGTTTCGCCGAAACCGGCCAGTTCCAGAAGATCGTGTTATACGCTAAGAAGGTGGGCTATACGCCGGATTATATCTATCTCCTGAGATCTGTGATGCGTACGAATCCCGAGCAAGGCGCAGGTTTCGCGGGTATGCTGGTCGCCGAGGACCCGCCGCTGGCTGACATCAATCAGATCGTGGACGTGTTCATGGAACAGAACATGGTACAGCAGTGCACAGCCTTCTTACTCGATGCCTTGAAGAACAACCGTCCCGAGGAAGGAGCCCTACAGACCAGATTGTTAGAGATGAATCTGATGTCAGCGCCTCAAGTGGCAGACGCGATTCTGGGCAATGGTATGTTCACGCACTACGACCGCGCCCATGTCGCTCAGCTCTGCGAGAAGGCCGGCCTACTGCAACGTGCTCTAGAGCATTACACAGACTTGTACGACATTAAGAGAGCTGTGGTTCACACACACTTGCTGTCCGCCGATTGGTTGGTGAGTTATTTCGGCACCCTATCAGTCGAAGACTCCCTCGAGTGTCTTAAGGCGATGCTACAAGCGAACATTCGCCAAAACCTTCAGATCTGCGTACAGATCGCAACCAAATACCACGAACAACTAACAACCAAGGCTCTCATTGAATTATTCGAGGGTTTCAAGACTTATGAAGGTCTATTCTACTTCCTCGGCTCCATTGTGAACTTCAGTCAGGATTCAGAAGTACATTTCAAGTACATCCAGGCTGCATGCAAGACTGGTCAGATCAAAGAAGTGGAACGCATCTGTCGCGAGTCGAACTGCTACAACGCGGAGCGTGTGAAAAATTTCCTTAAGGAAGCCAAACTTCCCGATCAGTTGCCTCTAATCATTGTGTGCGATAGATTCGACTTCGTACACGACCTCGTCTTGTATTTGTATAGAAACAGCCTCCAAAAGTACATCGAGATTTACGTACAGAAGGTAAATCCGTCAAGGCTGCCTGTAGTTGTCGGTGGTCTGTTGGATGTAGACTGCGCTGAGGATATAATCAAAAACCTCATACTCGTAGTCCGAGGACAGTTCTCCACAGACGAGCTCGTAGCTGAAGTTGAGAAGAGAAACAGACTAAAGTTGCTCCTACCATGGTTGGAGACGCGGGTCCACGAGGGCTGCAACGAGCCAGCGACGCACAACGCTCTAGCCAAGATTTACATTGATTCTAACAATAATCCCGAGAGATTCTTGAAGGAGAACCAATGGTACGATTCCCGTGTTGTGGGTCGCTACTGTGAGAAGCGCGATCCCCACCTCGCTTGTGTGGCGTACGAGCGTGGGCAGTGTGACCGCGAGCTGATCGCCGTATGCAATGATAACTCGCTGTTCAAGACTCAAGCGCGGTACCTCGTGAGGAGACGGGACCAGGACCTCTGGCTGGAAGTACTGGCCGAGTCAAACCCTTACAAGAGGCAGCTTATAGATCAGGTTGTACAAACGGCTCTGTCGGAAACCCAAGACCCTGAGGACATTTCGGTGACGGTGAAGGCATTCATGACAGCTGATTTGCCGAATGAGCTGATCGAGCTGTTAGAGAAGATTGTCCTAGATAACTCTGTGTTCTCTGATCACAGGAACCTACAGAATCTGCTTATTTTGACAGCTATCAAGGCCGATCGCACCCGTGTTATGGAATACATCAATCGCCTGGACAACTACGACGCACCGGACATCGCTAACATAGCCATCAATAACGAGCTATATGAGGAAGCTTTTGCTATCTTCAAGAAGTTCGATGTTAATACATCGGCCATTCAAGTCCTGATAGACCAAGTGAAGGATCTACAACGCGCTTATGAATTCGCCGAGCGTTGCAACGAGCCGGGCGTTTGGTCACAACTGGCTAAGGCTCAGTTACAGCAGGGATTGGTGAAGGAAGCCATTGATTCTTACATAAAGGCAGACGATCCATCCGCCTATATGGACGTAGTTGATACAGCCACCAAACAACAGTCCTGGGAGGATCTCGTCAGATACCTACAGGCTAGTTCTGGTCTACTTATACGTTATATAAATGACTTAATAATGGCTCGCAAGAAGGCTCGTGAATCGTACATAGAATCCGAATTGATTTACGCTTACGCCCGCACTGGGAGGCTGGCTGATCTCGAAGAGTTCATCTCTGGTCCGAACCACGCCGACATACAGAAGATAGGGGACAGGTGTTTCGACGATAAGATGTACAACGCTGCTAAACTGCTCTACAATAACGTGAGCAACTTTGCTCGTTTGGCCATCACTCTGGTGCATCTCAAGGAATTCCAAGGCGCGGTGGACAGTGCCCGCAAGGCGAACTCCACTCGTACATGGAAGGAGGTTTGCTTCGCCTGTGTCGACGCCGGTGAATTCCGTCTCGCTCAGATGTGCGGACTACATATAGTTGTGCACGCTGACGAGTTGGAGGACCTCATTAATTACTACCAGGATCGTGGTCATTTCGACGAGCTGATCAGTCTGCTCGAGGCTGCTCTCGGTCTCGAACGTGCTCATATGGGAATGTTCACAGAACTGGCCATACTTTACTCCAAGTACAAACCAGCTAAGATGCGCGAACATTTGGAACTATTCTGGTCTCGCGTTAACATTCCGAAGGTCCTTCGCGCCGCGGAACAAGCTCATCTGTGGTCCGAACTAGTGTTCCTGTACGATAAATACGAGGAGTACGACAACGCTGCTCTCACCATGATGCAACACCCCACAGAGGCATGGAGGGAGGGCCACTTCAAGGATATCATCACTAAGGTGGCGAATATGGAGCTGTACTACAAGGCTATCCAGTTTTACTTGGACTACAAACCTCTTCTTCTGAACGATCTTCTGCTAGTGCTGGCTCCACGTATGGATCACACTCGTGCTGTGGGATTCTTCACCAAGGCGGGCCACCTACAGCTGGTTAAGGCCTACCTGAGGTCCGTACAGAGCCTCAACAATAAAGCTGTCAATGAAGCACTCAATTCCCTGCTCATTGATGAAGAGGATTATCAGGGCTTGAGGACATCGATTGACGCTTTCGATAACTTTGACACGATCGCACTGGCGCAGCAACTGGAGAAACACGAACTCACCGAGTTTAGAAGAATTGCTGCCTATTTGTACAAAGGCAACAATAGATGGAAACAGAGCGTCGAGCTTTGCAAGAAGGACGCTTTATACGCTGATGCTATGGAATACGCCGCTGAGTCCCGTCAGGCAGATGTCGCTGAGGAACTGCTAGACTGGTTCCTTGAAAGACGCAACTACGAGTGCTTCTCGGCTACTTTGTACCAGTGTTACGACCTCTTGAAACCCGATGTAGTTATTGAACTGGCGTGGAGACATAATATCATGGATTTCGCAATGCCGTATCTCATCCAAACTGTACGCGAACTGACAACTAAAGTTGAAAAGTTGGAGGAGGCTGACGCCAAACGTAGCACAGAGAGCGCTGAACAAGAAGCCAAACCAGCAATGATTATGGAACCACAGCTTATGCTTACTGCCGGACCTTCAATGGCTTATCCGGGTGTACCGGCCCAGTCACCGTACGCTTACGCGGCGCAGGCACCGTCCCCGGCGCCCTACCACGGCTACGGCATGTAG
>DPOGS207010-PA
MAQVLPIRFQEHLQLTNIGINPASISFNTLTMESDKFICVREKVGDTSEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTEDVVFWKWISPNTLALVTKISVYHWSMEGDSTPVKMFDRHSSLAECQIINYRTDPKQQWLLLVGISAQQNRVVGAMQLYSVERKCSQPIEGHAASFATFKAEGNAELSTLFCFAVRTAQGGKLHIIEVGQTPAGNQQFPKKAVDVFFPAEAQNDFPVAMQVSPKYDVIYLITKYGYIHMYDIETGTCIYMNRISSDTIFVTAPHESTGGIIGVNRKGQVLSVTVEEESIVPYINTVLQNPELALRLAVRNNLAGAEELFVRKFNMLFTNGQYGEAAKVAAMAPRGILRTPQTIQRFQQVPTQPGQTSPLLQYFGILLDQAQLNKFESLELCRPVLLQGRKQLLEKWLKEEKLECSEELGDLVKQVDPTLALSVYLRANVAAKVIQCFAETGQFQKIVLYAKKVGYTPDYIYLLRSVMRTNPEQGAGFAGMLVAEDPPLADINQIVDVFMEQNMVQQCTAFLLDALKNNRPEEGALQTRLLEMNLMSAPQVADAILGNGMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLSADWLVSYFGTLSVEDSLECLKAMLQANIRQNLQICVQIATKYHEQLTTKALIELFEGFKTYEGLFYFLGSIVNFSQDSEVHFKYIQAACKTGQIKEVERICRESNCYNAERVKNFLKEAKLPDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCAEDIIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLETRVHEGCNEPATHNALAKIYIDSNNNPERFLKENQWYDSRVVGRYCEKRDPHLACVAYERGQCDRELIAVCNDNSLFKTQARYLVRRRDQDLWLEVLAESNPYKRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDNSVFSDHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAINNELYEEAFAIFKKFDVNTSAIQVLIDQVKDLQRAYEFAERCNEPGVWSQLAKAQLQQGLVKEAIDSYIKADDPSAYMDVVDTATKQQSWEDLVRYLQASSGLLIRYINDLIMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPAKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAALTMMQHPTEAWREGHFKDIITKVANMELYYKAIQFYLDYKPLLLNDLLLVLAPRMDHTRAVGFFTKAGHLQLVKAYLRSVQSLNNKAVNEALNSLLIDEEDYQGLRTSIDAFDNFDTIALAQQLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDALYADAMEYAAESRQADVAEELLDWFLERRNYECFSATLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEQEAKPAMIMEPQLMLTAGPSMAYPGVPAQSPYAYAAQAPSPAPYHGYGM-