DPOGS207201 | ||
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Transcript | DPOGS207201-TA | 375 bp |
Protein | DPOGS207201-PA | 124 aa |
Genomic position | DPSCF300001 + 5814781-5815155 | |
RNAseq coverage | 390x (Rank: top 31%) |
Annotation | ||||
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Heliconius | HMEL003604 | 4e-66 | 100.00% |   |
Bombyx | BGIBMGA014583-TA | 5e-65 | 98.39% |   |
Drosophila | His2A:CG33850-PA | 6e-66 | 100.00% |   |
EBI UniRef50 | UniRef50_G3H2T7 | 6e-57 | 90.16% | Histone H3 n=7 Tax=Cricetulus griseus RepID=G3H2T7_CRIGR |
NCBI RefSeq | XP_002075922.1 | 1e-64 | 100.00% | GK18500 [Drosophila willistoni] |
NCBI nr blastp | gi|24585673 | 3e-63 | 100.00% | histone H2A [Drosophila melanogaster] |
NCBI nr blastx | gi|194779416 | 3e-62 | 100.00% | GF22861 [Drosophila ananassae] |
Group | ||||
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Gene Ontology | GO:0005634 | 9.5e-81 | nucleus | |
GO:0003677 | 9.5e-81 | DNA binding | ||
GO:0006334 | 9.5e-81 | nucleosome assembly | ||
GO:0000786 | 9.5e-81 | nucleosome | ||
KEGG pathway | cqu:CpipJ_CPIJ012380 | 4e-64 |   | |
  | K11251 (H2A) | maps-> | Systemic lupus erythematosus | |
InterPro domain | [3-122] IPR002119 | 9.5e-81 | Histone H2A | |
[6-123] IPR009072 | 8.3e-62 | Histone-fold | ||
[17-90] IPR007125 | 2.7e-27 | Histone core | ||
Orthology group | MCL10052 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207201-TA
ATGTCTGGACGTGGTAAAGGTGGCAAAGTTAAGGGAAAGGCAAAGTCTCGTTCTAACCGTGCGGGTCTACAGTTTCCTGTGGGTCGTATACACAGATTGTTGAGAAAAGGTAACTACGCGGAGCGCGTCGGTGCCGGTGCTCCCGTTTATCTCGCTGCCGTTATGGAATATCTTGCAGCTGAAGTTCTCGAGTTGGCCGGTAACGCTGCCCGAGACAACAAGAAGACCAGAATCATACCTAGACATCTTCAGCTAGCCATAAGGAACGACGAAGAGTTGAACAAGCTTCTATCGGGTGTGACGATAGCTCAGGGAGGTGTACTACCAAACATCCAGGCCGTATTACTGCCAAAGAAAACGGAGAAGAAGGCCTAA
>DPOGS207201-PA
MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA-