| DPOGS207205 | ||
|---|---|---|
| Transcript | DPOGS207205-TA | 429 bp |
| Protein | DPOGS207205-PA | 142 aa |
| Genomic position | DPSCF300001 + 5821024-5823240 | |
| RNAseq coverage | 443x (Rank: top 28%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016813 | 4e-33 | 98.51% | |
| Bombyx | BGIBMGA007320-TA | 2e-17 | 58.73% | |
| Drosophila | His2B:CG17949-PA | 4e-32 | 95.52% | |
| EBI UniRef50 | UniRef50_G3HPV7 | 7e-30 | 91.30% | Histone H4 n=26 Tax=Eukaryota RepID=G3HPV7_CRIGR |
| NCBI RefSeq | NP_001153668.1 | 7e-32 | 98.51% | histone H2B-like protein [Bombyx mori] |
| NCBI nr blastp | gi|237648982 | 2e-30 | 98.51% | histone H2B-like protein [Bombyx mori] |
| NCBI nr blastx | gi|195357431 | 3e-28 | 97.01% | GM11716 [Drosophila sechellia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 1.1e-62 | nucleus | |
| GO:0003677 | 1.1e-62 | DNA binding | ||
| GO:0006334 | 1.1e-62 | nucleosome assembly | ||
| GO:0000786 | 1.1e-62 | nucleosome | ||
| KEGG pathway | nvi:100115273 | 5e-31 | ||
| K11252 (H2B) | maps-> | Systemic lupus erythematosus | ||
| InterPro domain | [1-67] IPR000558 | 1.1e-62 | Histone H2B | |
| [1-66] IPR009072 | 8.5e-40 | Histone-fold | ||
| [1-42] IPR007125 | 2.8e-13 | Histone core | ||
| Orthology group | MCL10018 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207205-TA
ATGTCTATCATGAACTCCTTCGTGAACGATATATTCGAACGCATCGCCGCCGAAGCATCACGTCTCGCGCACTACAACAAGAGATCCACCATTACATCGAGGGAGGTTCAGACGTCCGTGAGACTGTTGCTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGTGAAGGGACCAAAGCCGTCACTAAGTACACCAGTTCCAATGGTTCCCAAAATGCGATTCATATCTTGGATTTCCTGTCATACCGCAGAATACACAGAACAAGGAACCCATATGAAAATTTCTATAACTATTTGATGGTCAACATCAACGAGCAGGAGATCAATTCACCTTTGCACATGGCATATCTGAGCGAGTCCCAATTGAATATGATCCGTACTTTAGGGAACTTAAACCCAGCCACAGAAAATGTCATAAGGAACAAGAAATAA
>DPOGS207205-PA
MSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREVQTSVRLLLPGELAKHAVSEGTKAVTKYTSSNGSQNAIHILDFLSYRRIHRTRNPYENFYNYLMVNINEQEINSPLHMAYLSESQLNMIRTLGNLNPATENVIRNKK-